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Display genomic neighborhood for:

gene
enhancer
genomic coordinates
Marker types:
RHmkrSTSs mapped on RH map
cDNA STSs derived from cDNA
PolymPolymorphic markers
onYACSTSs mapped on YAC contigs

   GeneLoc map region for Chromosome 11 (13,158,648 - 17,161,828 bp) around "GC11M015158"


GenesEnhancers
#
#
Location
Location
Strand
Strand
Gene
Gene
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
Genetic Marker
Genetic Marker
Marker D-number
Marker D-number
Marker type
Marker type
1chr11: 13,228,197-13,228,975 - GC11M013228









2chr11: 13,228,505-13,229,435 + GC11P013228









3chr11: 13,233,505-13,239,749 - GC11M013233









4chr11: 13,236,255-13,237,002 + GC11P013236









5chr11: 13,238,405-13,239,475 + GC11P013238









6chr11: 13,240,985-13,241,013 - PIR32629
Exon structure










7chr11: 13,251,347-13,252,235 - GC11M013251









8chr11: 13,254,937-13,257,347 - GC11M013254









9chr11: 13,258,495-13,259,469 + GC11P013258









10chr11: 13,263,817-13,264,688 + GC11P013264









11chr11: 13,271,757-13,277,533 - GC11M013272









12chr11: 13,276,652-13,387,811 + ARNTL
Exon structure
Hs.65734 406 ENSG00000133794 aryl hydrocarbon receptor nuclear translocator like





13chr11: 13,282,121-13,286,726 + GC11P013282









14chr11: 13,334,333-13,334,861 + GC11P013334









15chr11: 13,338,863-13,339,058





STS1-cSRL-1B7 D11S4441



16chr11: 13,353,208-13,353,523 + RN7SKP151
Exon structure

106479162 ENSG00000222162 RNA, 7SK small nuclear pseudogene 151





17chr11: 13,377,552-13,377,685





RH119816




18chr11: 13,383,217-13,384,466 - GC11M013383









19chr11: 13,384,806-13,384,955





WI-14129
RHmkr cDNA

20chr11: 13,385,004-13,385,142





stSG40368
RHmkr cDNA

21chr11: 13,387,996-13,463,297 - BTBD10
Exon structure
Hs.332382 84280 ENSG00000148925 BTB domain containing 10





22chr11: 13,388,025-13,388,225





WI-9430

cDNA
onYAC
23chr11: 13,388,143-13,388,313





A005L39
RHmkr cDNA

24chr11: 13,388,143-13,388,313





A005L39
RHmkr cDNA

25chr11: 13,405,923-13,409,355 + GC11P013405









26chr11: 13,419,531-13,419,653





Bdy37h03




27chr11: 13,430,918-13,431,046





AFM224zc7 D11S926 RHmkr
Polym onYAC
28chr11: 13,430,921-13,431,038





AFM224zc7 D11S926 RHmkr
Polym onYAC
29chr11: 13,478,333-13,479,037 + ENSG00000254583
Exon structure


ENSG00000254583






30chr11: 13,479,150-13,479,178 + PIR60789
Exon structure










31chr11: 13,488,367-13,501,109 - GC11M013488









32chr11: 13,488,612-13,489,390 + ENSG00000255401
Exon structure


ENSG00000255401






33chr11: 13,492,054-13,496,181 - PTH
Exon structure
Hs.37045 5741 ENSG00000152266 parathyroid hormone





34chr11: 13,492,330-13,492,929





PTH.PCR1




35chr11: 13,492,341-13,492,492





sts-V00597
RHmkr cDNA

36chr11: 13,492,434-13,492,961





pth-A/pth-Z




37chr11: 13,492,675-13,492,960





SHGC-130951




38chr11: 13,492,743-13,492,894





WIAF-1271-STS




39chr11: 13,536,151-13,536,445





RH121740




40chr11: 13,568,605-13,568,632 + PIR42329
Exon structure










41chr11: 13,609,751-13,609,780 + PIR31032
Exon structure










42chr11: 13,610,363-13,610,771 - HMGN2P36
Exon structure

100874480 ENSG00000228901 high mobility group nucleosomal binding domain 2 pseudogene 36





43chr11: 13,618,103-13,618,210 + GC11P013618









44chr11: 13,660,569-13,660,599 + PIR55989
Exon structure










45chr11: 13,660,569-13,660,599 + GC11P013660









46chr11: 13,660,569-13,660,599 + GC11P013661









47chr11: 13,668,659-13,732,346 + FAR1
Exon structure
Hs.501991 84188 ENSG00000197601 fatty acyl-CoA reductase 1





48chr11: 13,669,327-13,670,149 + FAR1-IT1
Exon structure

106478978 ENSG00000254791 FAR1 intronic transcript 1





49chr11: 13,685,305-13,685,704 - RPL39P26
Exon structure

100271518 ENSG00000240454 ribosomal protein L39 pseudogene 26





50chr11: 13,686,550-13,686,658 - ENSG00000200685
Exon structure


ENSG00000200685






51chr11: 13,686,551-13,686,658 - GC11M013687









52chr11: 13,731,970-13,732,095





sts-N63551
RHmkr cDNA

53chr11: 13,732,210-13,732,294





2793/2794 D11S4062



54chr11: 13,756,027-13,757,564 + CENPUP1
Exon structure

100130384 ENSG00000255075 centromere protein U pseudogene 1





55chr11: 13,758,111-13,758,345 - ENSG00000255088
Exon structure


ENSG00000255088






56chr11: 13,781,379-13,848,002 + LINC02548
Exon structure

105376562 ENSG00000255411 long intergenic non-protein coding RNA 2548





57chr11: 13,787,559-13,787,848





SHGC-143854




58chr11: 13,826,843-13,879,499 - ENSG00000254927
Exon structure


ENSG00000254927






59chr11: 13,844,758-13,872,421 - LINC02545
Exon structure

105376561 ENSG00000254930 long intergenic non-protein coding RNA 2545





60chr11: 13,847,236-13,847,358





SHGC-3503




61chr11: 13,867,703-13,867,879





STS1-cSRL-36bc2 D11S3754



62chr11: 13,875,562-13,875,818





cSRL-3h2 D11S1099



63chr11: 13,907,295-13,920,638 + GC11P013907









64chr11: 13,907,483-13,907,590 - GC11M013907









65chr11: 13,907,484-13,907,590 - RNA5SP331
Exon structure

100873597 ENSG00000201856 RNA, 5S ribosomal pseudogene 331





66chr11: 13,918,773-13,919,064





SHGC-144309




67chr11: 13,921,450-13,924,863 - LOC101928132
Exon structure

101928132 ENSG00000254438






68chr11: 13,929,924-13,930,206





RH120078




69chr11: 13,941,848-13,941,965





SHGC-5566 D11S4553



70chr11: 13,941,946-13,942,054





SHGC-6193 D11S4560



71chr11: 13,962,637-14,268,133 + SPON1
Exon structure
Hs.643864 10418 ENSG00000262655 spondin 1





72chr11: 13,996,683-14,006,031 - GC11M013996









73chr11: 14,041,495-14,041,777





SHGC-79809




74chr11: 14,052,555-14,057,077 - GC11M014052









75chr11: 14,134,985-14,135,105 + GC11P014134









76chr11: 14,134,986-14,135,100 + RNA5SP332
Exon structure

100873598 ENSG00000212365 RNA, 5S ribosomal pseudogene 332





77chr11: 14,190,409-14,190,693





UT1036




78chr11: 14,229,857-14,230,011





AFM166ze1 D11S1307 RHmkr
Polym onYAC
79chr11: 14,229,906-14,230,037





AFM166ze1 D11S1307 RHmkr
Polym onYAC
80chr11: 14,262,846-14,273,691 - SPON1-AS1
Exon structure

109729138 ENSG00000254418 SPON1 antisense RNA 1





81chr11: 14,266,125-14,266,332





WI-12841
RHmkr cDNA

82chr11: 14,266,207-14,266,332





WI-18553
RHmkr cDNA

83chr11: 14,267,665-14,267,790





WI-11904
RHmkr cDNA

84chr11: 14,267,743-14,267,851





A005Y02
RHmkr cDNA

85chr11: 14,267,743-14,267,851





A005Y02
RHmkr cDNA

86chr11: 14,267,998-14,268,120





stSG40078
RHmkr cDNA

87chr11: 14,276,081-14,276,278





sts-N23599
RHmkr cDNA

88chr11: 14,277,920-14,364,506 - RRAS2
Exon structure
Hs.502004 22800 ENSG00000133818 RAS related 2





89chr11: 14,304,222-14,304,425





cSRL-2h9 D11S1068



90chr11: 14,384,418-14,384,544





STS1-cSRL-35d7 D11S3023



91chr11: 14,408,044-14,408,326





cSRL-5e3 D11S1186



92chr11: 14,413,936-14,414,206





SHGC-150527




93chr11: 14,413,968-14,414,147





AFMb341ye5 D11S4170

Polym onYAC
94chr11: 14,435,699-14,441,702 + LOC105376670
Exon structure

105376670 ENSG00000255074






95chr11: 14,443,440-14,500,027 - COPB1
Exon structure
Hs.339278 1315 ENSG00000129083 coatomer protein complex subunit beta 1





96chr11: 14,457,562-14,457,764





WI-13163
RHmkr cDNA

97chr11: 14,457,600-14,457,801





TIGR-A002G21
RHmkr cDNA

98chr11: 14,466,782-14,474,712 + GC11P014466









99chr11: 14,470,815-14,471,001





MS60(CA)/MS60(GT) D11S1245



100chr11: 14,470,854-14,471,021





A136 D11S861



101chr11: 14,478,892-14,478,953 + RNU7-49P
Exon structure

100147836 ENSG00000251991 RNA, U7 small nuclear 49 pseudogene





102chr11: 14,493,783-14,520,344 - ENSG00000256206
Exon structure


ENSG00000256206






103chr11: 14,504,874-14,643,635 - PSMA1
Exon structure
Hs.102798 5682 ENSG00000129084 proteasome subunit alpha 1





104chr11: 14,504,879-14,505,163





WI-7218 D11S4431


onYAC
105chr11: 14,504,900-14,505,048





SHGC-13819 D11S4651 RHmkr cDNA

106chr11: 14,505,081-14,505,246





pros30
RHmkr cDNA

107chr11: 14,543,551-14,543,632





stSG63554
RHmkr cDNA

108chr11: 14,564,546-14,564,640





SHGC-58344




109chr11: 14,600,041-14,600,071 - PIR39085
Exon structure










110chr11: 14,643,656-14,872,059 + PDE3B
Exon structure
Hs.445711 5140 ENSG00000152270 phosphodiesterase 3B





111chr11: 14,673,582-14,674,555 - MORF4L1P3
Exon structure

326593 ENSG00000255040 mortality factor 4 like 1 pseudogene 3





112chr11: 14,736,313-14,736,472





stSG8977
RHmkr cDNA

113chr11: 14,736,422-14,736,547





SGC34479
RHmkr cDNA

114chr11: 14,776,733-14,776,977





embl-W84658




115chr11: 14,815,872-14,816,013





AFM019tb4 D11S4193

Polym
116chr11: 14,815,899-14,816,146





PDE3B.pcr1




117chr11: 14,853,315-14,853,594





SHGC-145708




118chr11: 14,875,446-14,961,835 - GC11M014875









119chr11: 14,877,436-14,894,034 - CYP2R1
Exon structure
Hs.371427 120227 ENSG00000186104 cytochrome P450 family 2 subfamily R member 1





120chr11: 14,878,093-14,878,282





stSG58114
RHmkr cDNA

121chr11: 14,879,079-14,879,360





RH120233




122chr11: 14,892,207-14,899,344 + GC11P014892









123chr11: 14,899,937-14,900,280





SHGC-81226




124chr11: 14,904,997-15,082,342 + CALCB
Exon structure
Hs.534305 797 ENSG00000175868 calcitonin related polypeptide beta





125chr11: 14,907,499-14,907,999 + CALCP
Exon structure

798 ENSG00000253179 calcitonin pseudogene





126chr11: 14,907,845-14,907,994





calcp
RHmkr cDNA

127chr11: 14,953,367-14,953,716





SHGC-153444




128chr11: 14,966,657-14,966,843





sts-X15943
RHmkr cDNA

129chr11: 14,966,668-14,972,354 - CALCA
Exon structure
Hs.37058 796 ENSG00000110680 calcitonin related polypeptide alpha





130chr11: 14,967,464-14,967,681





WIAF-887-STS




131chr11: 14,968,518-14,968,792





WI-6982 D11S4427 RHmkr cDNA
onYAC
132chr11: 14,973,321-14,973,745





calca




133chr11: 14,987,708-14,988,641 - OR7E41P
Exon structure

8583 ENSG00000250640 olfactory receptor family 7 subfamily E member 41 pseudogene





134chr11: 15,012,461-15,012,770





RH118920




135chr11: 15,027,844-15,027,864 + GC11P015027









136chr11: 15,042,005-15,042,294





SHGC-141032




137chr11: 15,076,324-15,076,704





calcb




138chr11: 15,078,307-15,078,448





SHGC-11902 D11S4626



139chr11: 15,078,398-15,078,631 + GC11P015078









140chr11: 15,099,625-15,099,896





SHGC-140422




141chr11: 15,101,423-15,101,702





SHGC-155922




142chr11: 15,106,516-15,106,710





cSRL-4f8 D11S1141, D11S1142



143chr11: 15,111,430-15,247,208 + INSC
Exon structure
Hs.591997 387755 ENSG00000188487 INSC, spindle orientation adaptor protein





144chr11: 15,158,648-15,161,828 - GC11M015158









145chr11: 15,175,150-15,255,120 + GC11P015175









146chr11: 15,200,122-15,200,349





AFMa183ze1 D11S4093


onYAC
147chr11: 15,215,390-15,216,634 + GC11P015215









148chr11: 15,248,613-15,248,951





SHGC-149102




149chr11: 15,278,188-15,278,523





RH118837




150chr11: 15,281,281-15,281,392





AFMa306xg5 D11S4121

Polym onYAC
151chr11: 15,285,608-15,295,418 + GC11P015285









152chr11: 15,317,132-15,318,196 + GC11P015317









153chr11: 15,319,336-15,321,124 + GC11P015319









154chr11: 15,351,126-15,360,232 - GC11M015351









155chr11: 15,362,408-15,362,588





sts-H91174




156chr11: 15,390,824-15,391,142





UT691 D11S1901

Polym
157chr11: 15,414,558-15,415,018 - GC11M015414









158chr11: 15,430,804-15,632,468 - GC11M015430









159chr11: 15,432,124-15,436,353 + GC11P015432









160chr11: 15,440,725-15,441,068





RH122932




161chr11: 15,450,662-15,450,770





STS1-cSRL-44e11 D11S3840



162chr11: 15,477,734-15,479,098 + GC11P015477









163chr11: 15,481,808-15,481,893 - ENSG00000253072
Exon structure


ENSG00000253072






164chr11: 15,496,768-15,496,883





STS1-cSRL-19c2 D11S2449



165chr11: 15,516,306-15,516,561





AFM294zg5 D11S1791

Polym onYAC
166chr11: 15,536,258-15,536,463





S444 D11S574



167chr11: 15,537,234-15,537,409





WI-4754 D11S4030 RHmkr

onYAC
168chr11: 15,552,855-15,604,112 + LOC105376569
Exon structure

105376569 ENSG00000254946






169chr11: 15,564,337-15,564,681





RH122704




170chr11: 15,571,819-15,623,691 - LOC105376568
Exon structure

105376568 ENSG00000254789






171chr11: 15,593,746-15,594,060





SHGC-152932




172chr11: 15,600,479-15,600,506 + PIR52074
Exon structure










173chr11: 15,619,210-15,619,530





SHGC-155733




174chr11: 15,623,774-15,705,368 + LOC102724957
Exon structure

102724957 ENSG00000254695






175chr11: 15,700,972-15,768,476 - LOC105376567
Exon structure

105376567 ENSG00000254645






176chr11: 15,770,008-15,770,315





SHGC-147572




177chr11: 15,910,572-15,930,917 + LOC105376570
Exon structure

105376570 ENSG00000254661






178chr11: 15,934,944-15,935,058





Mfd58 D11S419

Polym onYAC
179chr11: 15,966,449-16,739,591 - SOX6
Exon structure
Hs.368226 55553 ENSG00000110693 SRY-box 6





180chr11: 15,966,450-15,968,295 - GC11M015966









181chr11: 15,967,251-15,967,380





stSG27414
RHmkr cDNA

182chr11: 15,969,101-15,969,234





WI-17844
RHmkr cDNA

183chr11: 15,969,533-15,969,621 - MIR6073
Exon structure

102464826 ENSG00000284094 microRNA 6073





184chr11: 15,971,691-15,971,774





stSG52615
RHmkr cDNA

185chr11: 15,973,068-15,973,374





SHGC-83438




186chr11: 15,982,925-15,983,046





927/928 D11S4042



187chr11: 15,988,131-15,988,411





SHGC-83873




188chr11: 15,995,242-15,995,553





SHGC-83953




189chr11: 15,996,260-16,001,902 + GC11P015996









190chr11: 16,015,921-16,016,040 + GC11P016015









191chr11: 16,022,699-16,047,546 + LOC105376572
Exon structure

105376572 ENSG00000254878






192chr11: 16,044,104-16,049,316 - GC11M016044









193chr11: 16,086,061-16,086,204





WI-16902
RHmkr cDNA

194chr11: 16,092,440-16,096,712 - GC11M016092









195chr11: 16,141,472-16,150,883 + GC11P016141









196chr11: 16,153,611-16,153,752





A010A46
RHmkr cDNA

197chr11: 16,153,611-16,153,752





A010A46
RHmkr cDNA

198chr11: 16,153,712-16,153,836





WI-17892
RHmkr cDNA

199chr11: 16,153,959-16,154,108





SGC35069
RHmkr cDNA

200chr11: 16,153,973-16,154,159





sts-H77693




201chr11: 16,176,020-16,176,163





CHLC.GGAT1C7 D11S1397 RHmkr
Polym onYAC
202chr11: 16,191,016-16,191,139





stSG16200
RHmkr cDNA

203chr11: 16,191,938-16,192,092





sts-H69535
RHmkr cDNA

204chr11: 16,200,428-16,200,889 - GC11M016200









205chr11: 16,200,489-16,200,638





SHGC-37207
RHmkr cDNA

206chr11: 16,203,293-16,203,581





RH120774




207chr11: 16,219,174-16,219,201 - PIR43279
Exon structure










208chr11: 16,223,649-16,223,847 + GC11P016223









209chr11: 16,224,118-16,224,145 - PIR42201
Exon structure










210chr11: 16,226,350-16,226,499





SHGC-37588




211chr11: 16,226,550-16,226,579 - PIR58732
Exon structure










212chr11: 16,226,550-16,226,579 - GC11M016227









213chr11: 16,239,763-16,239,911 + GC11P016239









214chr11: 16,278,533-16,278,863





SHGC-141073




215chr11: 16,293,122-16,297,521 - GC11M016293









216chr11: 16,294,904-16,295,112 + GC11P016294









217chr11: 16,315,948-16,316,101





WI-3953 D11S2336 RHmkr

onYAC
218chr11: 16,356,826-16,357,158 + GC11P016356









219chr11: 16,357,869-16,358,069 + GC11P016357









220chr11: 16,359,882-16,370,958 + GC11P016359









221chr11: 16,450,479-16,450,798





SHGC-104674




222chr11: 16,452,371-16,452,708





SHGC-153595




223chr11: 16,471,196-16,471,470





SHGC-82799




224chr11: 16,482,089-16,482,361 - GC11M016482









225chr11: 16,483,362-16,484,709 - AKR1B1P3
Exon structure

729347 ENSG00000213785 aldo-keto reductase family 1 member B1 pseudogene 3





226chr11: 16,535,875-16,536,153





RH121771




227chr11: 16,556,153-16,556,281





stSG26356
RHmkr cDNA

228chr11: 16,576,851-16,577,135 + RN7SL188P
Exon structure

106479290 ENSG00000241943 RNA, 7SL, cytoplasmic 188, pseudogene





229chr11: 16,613,023-16,655,850 + LOC105376571
Exon structure

105376571







230chr11: 16,613,132-16,758,354 + C11orf58
Exon structure
Hs.645792 10944 ENSG00000110696 chromosome 11 open reading frame 58





231chr11: 16,613,759-16,613,787 + PIR48413
Exon structure










232chr11: 16,655,116-16,655,417





RH120198




233chr11: 16,690,230-16,690,479





WI-2899 D11S4408


onYAC
234chr11: 16,714,747-16,714,868





STS1-cSRL-15g4 D11S2705



235chr11: 16,755,499-16,755,636





970




236chr11: 16,757,794-16,757,922





stSG50979
RHmkr cDNA

237chr11: 16,757,888-16,758,045





embl-N24765




238chr11: 16,757,902-16,758,048





stSG58470
RHmkr cDNA

239chr11: 16,777,297-17,014,443 - PLEKHA7
Exon structure
Hs.12332 144100 ENSG00000166689 pleckstrin homology domain containing A7





240chr11: 16,777,299-16,780,685 - GC11M016777









241chr11: 16,777,551-16,777,714





stSG31673
RHmkr cDNA

242chr11: 16,787,666-16,787,896





embl-N66954




243chr11: 16,799,766-16,800,084





RH123812




244chr11: 16,807,078-16,807,229 + GC11P016807









245chr11: 16,819,453-16,819,708





cSRL-2f5 D11S1059



246chr11: 16,838,196-16,838,504





STS1-cSRL-17g6 D11S3297



247chr11: 16,842,253-16,842,587 + RN7SKP90
Exon structure

106481809 ENSG00000199883 RNA, 7SK small nuclear pseudogene 90





248chr11: 16,862,545-16,862,826





STS1-cSRL-179h9 D11S3284



249chr11: 16,871,213-16,871,495





RH121560




250chr11: 16,889,267-17,049,666 - GC11M016889









251chr11: 16,892,316-16,892,493





AFMa204ya9 D11S4099

Polym
252chr11: 16,897,838-16,897,980





stSG21524
RHmkr cDNA

253chr11: 16,942,497-16,942,646





SHGC-30765
RHmkr cDNA

254chr11: 16,963,346-16,963,496





SHGC-33574
RHmkr cDNA

255chr11: 16,963,384-16,963,527





sts-T83668
RHmkr cDNA

256chr11: 16,966,983-16,967,308





SHGC-112562




257chr11: 16,970,843-17,090,180 - GC11M016970









258chr11: 16,974,629-16,975,044 - RPL36AP37
Exon structure

729362 ENSG00000244398 ribosomal protein L36a pseudogene 37





259chr11: 16,974,682-16,975,006





WI-8054 D15S1179
cDNA
onYAC
260chr11: 16,974,693-16,975,013 - GC11M016974









261chr11: 17,003,311-17,003,608





SHGC-171524




262chr11: 17,024,208-17,024,452





AFMb326xf9 D11S4160

Polym onYAC
263chr11: 17,052,001-17,052,984 + OR7E14P
Exon structure
Hs.523504 10819 ENSG00000184669 olfactory receptor family 7 subfamily E member 14 pseudogene





264chr11: 17,074,389-17,077,787 - RPS13
Exon structure
Hs.446588 6207 ENSG00000110700 ribosomal protein S13





265chr11: 17,074,652-17,074,744 - GC11M017074









266chr11: 17,074,653-17,074,744 - SNORD14A
Exon structure

26822 ENSG00000272034 small nucleolar RNA, C/D box 14A





267chr11: 17,075,777-17,075,868 - GC11M017076









268chr11: 17,075,778-17,075,868 - SNORD14B
Exon structure

85388 ENSG00000201403 small nucleolar RNA, C/D box 14B





269chr11: 17,077,635-17,077,667 - GC11M017077









270chr11: 17,077,635-17,077,667 - GC11M017078









271chr11: 17,077,635-17,077,667 - GC11M017079









272chr11: 17,086,617-17,086,766





SHGC-16747 D11S4711



273chr11: 17,086,789-17,086,909





stSG53339
RHmkr cDNA

274chr11: 17,088,970-17,089,101





stSG53787
RHmkr cDNA

275chr11: 17,115,651-17,115,763 - GC11M017123









276chr11: 17,115,652-17,115,763 - RNU6-593P
Exon structure

106479828 ENSG00000201586 RNA, U6 small nuclear 593, pseudogene





277chr11: 17,137,976-17,138,265 - RPL34P24
Exon structure

100271309 ENSG00000240808 ribosomal protein L34 pseudogene 24





278chr11: 17,141,307-17,141,449





embl-AA011512