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MarkerCard for AFM072yd3


Location

Synonyms
  • RH3044
  • STS503
  • D11S902
  • RH15041
  • RH51860
  • STS12585
  • AFM072yd3
  • AFM072yd3a
  • AFM072yd3m
  • AFM072yd3a/AFM072yd3m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:

AFM072yd3 (GeneBridge 4 panel) from GeneMap
Location (cR3000):66.69 cR
Lod Score:P>3.00
Data obtained from:Whitehead Institute/MIT Center for Genome Research
Marker type:microsatellite
RHDB ID RH3044
Linkage Mapping

According to:
Entry AFM072yd3 from Genethon
Location:24.7 cM
Heterozygosity:0.80
Number of Alleles:10
Allele Size Range:145 - 163 bp
Entry AFM072yd3 from Marshfield
Location:21.47 cM
Heterozygosity:0.79
Allele Size Range:145 - 163 bp
STS to YAC Content Mapping

According to:
Entry AFM072YD3 from Whitehead
YAC Contig Name:WC11.1
Sequences

According to:

Entry AFM072yd3 from Genethon
CA strand primer:CCCGGCTGTGAATATACTTAATGC
GT strand primer:CCCAACAGCAATGGGAAGTT
Allele Size Range:145 - 163 bp
Full Sequence

Entry AFM072YD3 from Whitehead
Left strand primer:CCCGGCTGTGAATATACTTAATGC
Right strand primer:CCCAACAGCAATGGGAAGTT
Product Size:148

Primer 1:CCCGGCTGTGAATATACTTAATGC
Primer 2:CCCAACAGCAATGGGAAGTT
Product Size:145