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MarkerCard for AFM114yc9


Location

Synonyms
  • w4850
  • RH52299
  • RH84216
  • RH85649
  • D11S1760
  • STS42651
  • AFM114yc9
  • WI_RHID53
  • AFM114yc9a
  • AFM114yc9m
  • SHGC-20655
  • AFM114yc9a/AFM114yc9m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:

AFM114yc9 (GeneBridge 4 panel) from GeneMap
Location (cR3000):36.52 cR
Lod Score:F
Data obtained from:Whitehead Institute/MIT Center for Genome Research
Marker type:microsatellite
RHDB ID RH52299
Linkage Mapping

According to:
Entry AFM114yc9 from Genethon
Location:14.1 cM
Heterozygosity:0.75
Number of Alleles:9
Allele Size Range:80 - 100 bp
Entry AFM114yc9 from Marshfield
Location:11.67 cM
Heterozygosity:0.75
Allele Size Range:80 - 100 bp
STS to YAC Content Mapping

According to:
Entry AFM114YC9 from Whitehead
YAC Contig Name:WC11.0
Sequences

According to:

Entry AFM114yc9 from Genethon
CA strand primer:GATCTCAAGTGTTTCCCCAC
GT strand primer:AAACGATGTCTGTCCACTCA
Allele Size Range:80 - 100 bp
Full Sequence

Entry AFM114YC9 from Whitehead
Left strand primer:GATCTCAAGTGTTTCCCCAC
Right strand primer:AAACGATGTCTGTCCACTCA
Product Size:90

Primer 1:GATCTCAAGTGTTTCCCCAC
Primer 2:AAACGATGTCTGTCCACTCA
Product Size:90

GeneMap Primers:
Left strand primer:GATCTCAAGTGTTTCCCCAC
Right strand primer:AAACGATGTCTGTCCACTCA
Product Size:90