Location
| |
| Synonyms |
- RH4010
- STS697
- D16S409
- RH42138
- RH54565
- STS27201
- AFM161xa1
- AFM161xa1a
- AFM161xa1m
- AFM161xa1a/AFM161xa1m
|
| Marker types |
- STS mapped on RH map
- Polymorphic marker
- STS mapped on YAC contig
|
| External Links |
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|
Radiation Hybrid Mapping
According to:
|
AFM161xa1 (G3 panel) from Stanford
| Location (cR10,000): | 1676 cR |
| Bin 35 |
AFM161xa1 (G3 panel) from GeneMap
| Location (cR10,000): | 2120 cR |
| Lod Score: | F |
| Data obtained from: | Stanford Human Genome Center |
| Marker type: | microsatellite |
| RHDB ID RH828 |
AFM161xa1 (GeneBridge 4 panel) from GeneMap
| Location (cR3000): | 327.21 cR |
| Lod Score: | F |
| Data obtained from: | Genethon |
| Marker type: | microsatellite |
| RHDB ID RH42138 |
|
Linkage Mapping
According to:
|
Entry AFM161xa1 from Genethon
| Location: | 56.2 cM |
| Heterozygosity: | 0.70 |
| Number of Alleles: | 7 |
| Allele Size Range: | 135 - 147 bp |
Entry AFM161xa1 from Marshfield
| Location: | 58.46 cM |
| Heterozygosity: | 0.70 |
| Allele Size Range: | 135 - 147 bp |
|
STS to YAC Content Mapping
According to:
|
Entry AFM161XA1 from Whitehead
|
Sequences
According to:
|
Entry AFM161xa1 from Genethon
| CA strand primer: | TGAATCTTACATCCCATCCC |
| GT strand primer: | AGTCAGTCTGTCCAGAGGTG |
| Allele Size Range: | 135 - 147 bp |
Full Sequence
|
Entry AFM161XA1 from Whitehead
| Left strand primer: | TGAATCTTACATCCCATCCC |
| Right strand primer: | AGTCAGTCTGTCCAGAGGTG |
| Product Size: | 138 |
| Primer 1: | TGAATCTTACATCCCATCCC |
| Primer 2: | AGTCAGTCTGTCCAGAGGTG |
| Product Size: | 135
|
GeneMap Primers:
| Left strand primer: | ATGTGAATCTTACATCCCATCC |
| Right strand primer: | GCTTTTAGAGTCAGTCTGTCCA |
| Product Size: | 150 |
|
