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MarkerCard for AFM178xf12


Location

Synonyms
  • RH3151
  • STS767
  • D11S915
  • RH42157
  • RH51773
  • STS28765
  • AFM178xf12
  • AFM178xf12a
  • AFM178xf12m
  • AFM178xf12a/AFM178xf12m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:

AFM178xf12 (GeneBridge 4 panel) from GeneMap
Location (cR3000):84.00 cR
Lod Score:P1.14
Data obtained from:Genethon
Marker type:microsatellite
RHDB ID RH42157
Linkage Mapping

According to:
Entry AFM178xf12 from Genethon
Location:34.3 cM
Heterozygosity:0.81
Number of Alleles:9
Allele Size Range:254 - 274 bp
Entry AFM178xf12 from Marshfield
Location:30.88 cM
Heterozygosity:0.82
Allele Size Range:254 - 274 bp
STS to YAC Content Mapping

According to:
Entry AFM178XF12 from Whitehead
YAC Contig Name:WC11.2
Sequences

According to:

Entry AFM178xf12 from Genethon
CA strand primer:TGGTGTAACAATTAGCAGTG
GT strand primer:CTAGGACAAAGCAAAACTTC
Allele Size Range:254 - 274 bp
Full Sequence

Entry AFM178XF12 from Whitehead
Left strand primer:TGGTGTAACAATTAGCAGTG
Right strand primer:CTAGGACAAAGCAAAACTTC
Product Size:267

Primer 1:TGGTGTAACAATTAGCAGTG
Primer 2:CTAGGACAAAGCAAAACTTC
Product Size:254