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MarkerCard for AFM212xa11


Location

Synonyms
  • RH715
  • STS961
  • D11S921
  • RH13375
  • RH72711
  • stSG723
  • STS27353
  • SHGC-3778
  • AFM212xa11
  • SHGC-pending:RH715:a
  • SHGC-pending:RH715:b

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM212XA11 (G3 panel) from Stanford
Location (cR10,000):673 cR
Bin 22

AFM212xa11 (G3 panel) from GeneMap
Location (cR10,000):673 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH715
AFM212xa11 (GeneBridge 4 panel) from GeneMap
Location (cR3000):71.49 cR
Lod Score:F
Data obtained from:Sanger Centre
Marker type:microsatellite
RHDB ID RH13375
Linkage Mapping

According to:
Entry AFM212xa11 from Genethon
Location:24.9 cM
Heterozygosity:0.68
Number of Alleles:6
Allele Size Range:243 - 255 bp
Entry AFM212xa11 from Marshfield
Location:21.47 cM
Heterozygosity:0.69
Allele Size Range:243 - 255 bp
STS to YAC Content Mapping

According to:
Entry AFM212XA11 from Whitehead
YAC Contig Name:WC11.1
Sequences

According to:

Entry AFM212xa11 from Genethon
CA strand primer:TGCATTCAACAAATCAACA
GT strand primer:CTTGGACCATTTAATCTAAAGTAAT
Allele Size Range:243 - 255 bp
Full Sequence

Entry AFM212XA11 from Whitehead
Left strand primer:TGCATTCAACAAATCAACA
Right strand primer:CTTGGACCATTTAATCTAAAGTAAT
Product Size:246

Primer 1:TGACTTTCATGCATTCAACA
Primer 2:TAGATCATAAAATCGATGAGGG
Product Size:129

GeneMap Primers:
Left strand primer:TGACTTTCATGCATTCAACA
Right strand primer:TAGATCATAAAATCGATGAGGG
Product Size:129