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MarkerCard for AFM225zf2


Location

Synonyms
  • RH4111
  • RH9569
  • D16S419
  • RH15275
  • RH54822
  • STS1032
  • STS8857
  • AFM225zf2
  • AFM225zf2a
  • AFM225zf2m
  • AFM225zf2a/AFM225zf2m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:

AFM225zf2 (GeneBridge 4 panel) from GeneMap
Location (cR3000):347.05 cR
Lod Score:F
Data obtained from:Whitehead Institute/MIT Center for Genome Research
Marker type:microsatellite
RHDB ID RH4111
Linkage Mapping

According to:
Entry AFM225zf2 from Genethon
Location:65.6 cM
Heterozygosity:0.75
Number of Alleles:9
Allele Size Range:146 - 164 bp
Entry AFM225zf2 from Marshfield
Location:67.40 cM
Heterozygosity:0.76
Allele Size Range:146 - 164 bp
STS to YAC Content Mapping

According to:
Entry AFM225ZF2 from Whitehead
YAC Contig Name:WC16.4
Sequences

According to:

Entry AFM225zf2 from Genethon
CA strand primer:ATTTTTAAGGAATGTAAAGnACACA
GT strand primer:GACGTTAGACCAGGAGTCAG
Allele Size Range:146 - 164 bp
Full Sequence

Entry AFM225ZF2 from Whitehead
Left strand primer:ATTTTTAAGGAATGTAAAGNACACA
Right strand primer:GACGTTAGACCAGGAGTCAG
Product Size:151

Primer 1:ATTTTTAAGGAATGTAAAGNACACA
Primer 2:GACGTTAGACCAGGAGTCAG
Product Size:146