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MarkerCard for AFM234wh12


Location

Synonyms
  • D11S928
  • RH38621
  • RH42315
  • STS2074
  • SHGC-5325
  • AFM234wh12
  • AFM234wh12a
  • AFM234wh12m
  • GC378-D11S928
  • AFM234wh12a/AFM234wh12m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM234wh12 (G3 panel) from Stanford
Location (cR10,000):945 cR
Bin 24

AFM234wh12 (G3 panel) from GeneMap
Location (cR10,000):945 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH38621
Linkage Mapping

According to:
Entry AFM234wh12 from Genethon
Location:29.7 cM
Heterozygosity:0.70
Number of Alleles:6
Allele Size Range:277 - 289 bp
Entry AFM234wh12 from Marshfield
Location:26.34 cM
Heterozygosity:0.69
Allele Size Range:277 - 289 bp
STS to YAC Content Mapping

According to:
Entry AFM234WH12 from Whitehead
YAC Contig Name:WC11.2
Sequences

According to:

Entry AFM234wh12 from Genethon
CA strand primer:AAGTGATCCACCTGCCTTG
GT strand primer:GCCTCTGAGAATTAGTGTCTGTC
Allele Size Range:277 - 289 bp
Full Sequence

Entry AFM234WH12 from Whitehead
Left strand primer:AAGTGATCCACCTGCCTTG
Right strand primer:GCCTCTGAGAATTAGTGTCTGTC
Product Size:278

Primer 1:AAGTGATCCACCTGCCTTG
Primer 2:GCCTCTGAGAATTAGTGTCTGTC
Product Size:277

GeneMap Primers:
Left strand primer:ATCTCTTCATTCTCCCAACTGTC
Right strand primer:TGTCTGTCATTAGGATAGAGGC
Product Size:170