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MarkerCard for AFM240vc1


Location

Synonyms
  • RH1077
  • D19S224
  • RH95634
  • STS1081
  • SHGC-984
  • STS12950
  • AFM240vc1
  • SHGC-pending:RH1077:a
  • SHGC-pending:RH1077:b

Marker types
  • STS mapped on RH map
  • Polymorphic marker

External Links --
Radiation Hybrid Mapping

According to:

AFM240vc1 (GeneBridge 4 panel) from GeneMap
Location (cR3000):216.14 cR
Lod Score:F
Data obtained from:Sanger Centre
Marker type:microsatellite
RHDB ID RH13419
Linkage Mapping

According to:
Entry AFM240vc1 from Genethon
Location:60.9 cM
Heterozygosity:0.80
Number of Alleles:9
Allele Size Range:240 - 262 bp
Entry AFM240vc1 from Marshfield
Location:61.49 cM
Heterozygosity:0.81
Allele Size Range:240 - 262 bp
STS to YAC Content Mapping

According to:
--
Sequences

According to:

Entry AFM240vc1 from Genethon
CA strand primer:AACACCATTCCTCATCTTCC
GT strand primer:CCCAGGCCCTATCTGA
Allele Size Range:240 - 262 bp
Full Sequence

Entry AFM240VC1 from Whitehead
Left strand primer:AACACCATTCCTCATCTTCC
Right strand primer:CCCAGGCCCTATCTGA
Product Size:243

Primer 1:CCTCAACTTCCTCCCCTACAC
Primer 2:AATCTCTGTAATAGTGTCCCCC
Product Size:262

GeneMap Primers:
Left strand primer:ACACCATTCCTCATCTTCCT
Right strand primer:AATCTCTGTAATAGTGTCCCCC
Product Size:262