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MarkerCard for AFM248xf9


Location

Synonyms
  • D11S1323
  • AFM248xf9
  • AFM248xf9a
  • AFM248xf9m
  • AFM248xf9a/AFM248xf9m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM248xf9 (G3 panel) from Stanford
Location (cR10,000):181 cR
Bin 9

AFM248xf9 (G3 panel) from GeneMap
Location (cR10,000):181 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31202
Linkage Mapping

According to:
Entry AFM248xf9 from Genethon
Location:10.6 cM
Heterozygosity:0.45
Number of Alleles:4
Allele Size Range:201 - 207 bp
Entry AFM248xf9 from Marshfield
Location:11.99 cM
Heterozygosity:0.46
Allele Size Range:201 - 207 bp
STS to YAC Content Mapping

According to:
Entry AFM248XF9 from Whitehead
YAC Contig Name:WC11.0
Sequences

According to:

Entry AFM248xf9 from Genethon
CA strand primer:TGCTGCTTAGAATGAGTAGATGTC
GT strand primer:CTCTATGAAGTTGGAGTCTAGGTTG
Allele Size Range:201 - 207 bp
Full Sequence

Entry AFM248XF9 from Whitehead
Left strand primer:TGCTGCTTAGAATGAGTAGATGTC
Right strand primer:CTCTATGAAGTTGGAGTCTAGGTTG
Product Size:204

Primer 1:TGCTGCTTAGAATGAGTAGATGTC
Primer 2:CTCTATGAAGTTGGAGTCTAGGTTG
Product Size:201

GeneMap Primers:
Left strand primer:TCTAATTTCTTCTCCCACCC
Right strand primer:TGGGAGTTTCTCTGTGCTAG
Product Size:134