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MarkerCard for AFM248zc1


Location

Synonyms
  • D19S225
  • RH15326
  • STS8095
  • AFM248zc1
  • AFM248zc1a
  • AFM248zc1m
  • AFM248zc1a/AFM248zc1m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:

AFM248zc1 (G3 panel) from GeneMap
Location (cR10,000):1303 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH755
AFM248zc1 (GeneBridge 4 panel) from GeneMap
Location (cR3000):188.48 cR
Lod Score:F
Data obtained from:Genethon
Marker type:microsatellite
RHDB ID RH15326
Linkage Mapping

According to:
Entry AFM248zc1 from Genethon
Location:55.9 cM
Heterozygosity:0.71
Number of Alleles:6
Allele Size Range:170 - 180 bp
Entry AFM248zc1 from Marshfield
Location:56.69 cM
Heterozygosity:0.74
Allele Size Range:170 - 180 bp
STS to YAC Content Mapping

According to:
Entry AFM248ZC1 from Whitehead
YAC Contig Name:WC19.2
Sequences

According to:

Entry AFM248zc1 from Genethon
CA strand primer:ATGTATGTTTGGTGTCCCC
GT strand primer:GTACAGTCGTGTGTGTGTGG
Allele Size Range:170 - 180 bp
Full Sequence

Entry AFM248ZC1 from Whitehead
Left strand primer:ATGTATGTTTGGTGTCCCC
Right strand primer:GTACAGTCGTGTGTGTGTGG
Product Size:177

Primer 1:ATGTATGTTTGGTGTCCCC
Primer 2:GTACAGTCGTGTGTGTGTGG
Product Size:170

GeneMap Primers:
Left strand primer:CTATACCATGTGTACTGCCTTTC
Right strand primer:TTAGATGGGAATGAGGGTAACTTG
Product Size:184