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MarkerCard for AFM277wg1


Location

Synonyms
  • D11S1331
  • AFM277wg1
  • AFM277wg1a
  • AFM277wg1m
  • AFM277wg1a/AFM277wg1m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM277wg1 (G3 panel) from Stanford
Location (cR10,000):237 cR
Bin 11

AFM277wg1 (G3 panel) from GeneMap
Location (cR10,000):237 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31248
Linkage Mapping

According to:
Entry AFM277wg1 from Genethon
Location:14.8 cM
Heterozygosity:0.70
Number of Alleles:7
Allele Size Range:191 - 205 bp
Entry AFM277wg1 from Marshfield
Location:12.92 cM
Heterozygosity:0.72
Allele Size Range:191 - 205 bp
STS to YAC Content Mapping

According to:
Entry AFM277WG1 from Whitehead
YAC Contig Name:WC11.0
Sequences

According to:

Entry AFM277wg1 from Genethon
CA strand primer:GCTGCTTCCATGAGAGGATACTG
GT strand primer:GCAGAGCCCTTTGCAGTCTT
Allele Size Range:191 - 205 bp
Full Sequence

Entry AFM277WG1 from Whitehead
Left strand primer:GCTGCTTCCATGAGAGGATACTG
Right strand primer:GCAGAGCCCTTTGCAGTCTT
Product Size:200

Primer 1:GCTGCTTCCATGAGAGGATACTG
Primer 2:GCAGAGCCCTTTGCAGTCTT
Product Size:191

GeneMap Primers:
Left strand primer:CCATGAGAGGATACTGACTTTG
Right strand primer:TTACCTGCAAAAACTCTCCA
Product Size:134