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MarkerCard for AFM304xf1


Location

Synonyms
  • D16S508
  • RH42528
  • STS36138
  • AFM304xf1
  • AFM304xf1a
  • AFM304xf1m
  • AFM304xf1a/AFM304xf1m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM304xf1 (G3 panel) from Stanford
Location (cR10,000):2285 cR
Bin 53

AFM304xf1 (G3 panel) from GeneMap
Location (cR10,000):2729 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH990
Linkage Mapping

According to:
Entry AFM304xf1 from Genethon
Location:80.0 cM
Heterozygosity:0.46
Number of Alleles:3
Allele Size Range:89 - 93 bp
Entry AFM304xf1 from Marshfield
Location:57.79 cM
Heterozygosity:0.44
Allele Size Range:89 - 93 bp
STS to YAC Content Mapping

According to:
Entry AFM304XF1 from Whitehead
YAC Contig Name:WC16.5
Sequences

According to:

Entry AFM304xf1 from Genethon
CA strand primer:CAGGAAAATAAATCTAACACACATA
GT strand primer:CCTGTGGGCACTGATAAATA
Allele Size Range:89 - 93 bp
Full Sequence

Entry AFM304XF1 from Whitehead
Left strand primer:CAGGAAAATAAATCTAACACACATA
Right strand primer:CCTGTGGGCACTGATAAATA
Product Size:91

Primer 1:CAGGAAAATAAATCTAACACACATA
Primer 2:CCTGTGGGCACTGATAAATA
Product Size:93

GeneMap Primers:
Left strand primer:GCATGAGATGAGGGGTTTAT
Right strand primer:CCTGTGGGCACTGATAAATA
Product Size:116