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MarkerCard for AFM323wf5


Location

Synonyms
  • RH15455
  • STS4833
  • D11S1349
  • AFM323wf5
  • AFM323wf5a
  • AFM323wf5m
  • AFM323wf5a/AFM323wf5m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM323wf5 (G3 panel) from Stanford
Location (cR10,000):403 cR
Bin 16

AFM323wf5 (G3 panel) from GeneMap
Location (cR10,000):403 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH565
AFM323wf5 (GeneBridge 4 panel) from GeneMap
Location (cR3000):50.28 cR
Lod Score:P0.90
Data obtained from:Genethon
Marker type:microsatellite
RHDB ID RH15455
Linkage Mapping

According to:
Entry AFM323wf5 from Genethon
Location:20.6 cM
Heterozygosity:0.84
Number of Alleles:11
Allele Size Range:260 - 280 bp
Entry AFM323wf5 from Marshfield
Location:18.26 cM
Heterozygosity:0.84
Allele Size Range:260 - 280 bp
STS to YAC Content Mapping

According to:
Entry AFM323WF5 from Whitehead
YAC Contig Name:WC11.1
Sequences

According to:

Entry AFM323wf5 from Genethon
CA strand primer:AGAGAGCACTTGAGTGAAGG
GT strand primer:GGACTTTTCATCCCAAATC
Allele Size Range:260 - 280 bp
Full Sequence

Entry AFM323WF5 from Whitehead
Left strand primer:AGAGAGCACTTGAGTGAAGG
Right strand primer:GGACTTTTCATCCCAAATC
Product Size:275

Primer 1:AGAGAGCACTTGAGTGAAGG
Primer 2:GGACTTTTCATCCCAAATC
Product Size:276

GeneMap Primers:
Left strand primer:AGGGTTCTCCAGAGAAACAG
Right strand primer:GGACTTTTCATCCCAAATCT
Product Size:133