Location
| |
| Synonyms |
- RH601
- D16S514
- RH13687
- RH72609
- STS2352
- STS8154
- stSG1168
- AFM330vd9
- SHGC-2227
- SHGC-pending:RH601:a
- SHGC-pending:RH601:b
|
| Marker types |
- STS mapped on RH map
- Polymorphic marker
- STS mapped on YAC contig
|
| External Links |
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|
Radiation Hybrid Mapping
According to:
|
AFM330vd9 (G3 panel) from Stanford
| Location (cR10,000): | 2258 cR |
| Bin 52 |
AFM330vd9 (G3 panel) from GeneMap
| Location (cR10,000): | 2702 cR |
| Lod Score: | F |
| Data obtained from: | Stanford Human Genome Center |
| Marker type: | microsatellite |
| RHDB ID RH601 |
AFM330vd9 (GeneBridge 4 panel) from GeneMap
| Location (cR3000): | 381.58 cR |
| Lod Score: | F |
| Data obtained from: | Sanger Centre |
| Marker type: | microsatellite |
| RHDB ID RH13687 |
|
Linkage Mapping
According to:
|
Entry AFM330vd9 from Genethon
| Location: | 80.0 cM |
| Heterozygosity: | 0.82 |
| Number of Alleles: | 9 |
| Allele Size Range: | 117 - 133 bp |
Entry AFM330vd9 from Marshfield
| Location: | 81.15 cM |
| Heterozygosity: | 0.82 |
| Allele Size Range: | 121 - 133 bp |
|
STS to YAC Content Mapping
According to:
|
Entry AFM330VD9 from Whitehead
|
Sequences
According to:
|
Entry AFM330vd9 from Genethon
| CA strand primer: | CTATCCACTCACTTTCCAGG |
| GT strand primer: | TCCCACTGATCATCTTCTC |
| Allele Size Range: | 117 - 133 bp |
Full Sequence
|
Entry AFM330VD9 from Whitehead
| Left strand primer: | CTATCCACTCACTTTCCAGG |
| Right strand primer: | TCCCACTGATCATCTTCTC |
| Product Size: | 122 |
| Primer 1: | ATGTGCTGCTGTTGAAAGTT |
| Primer 2: | CACATTTTCCCACTGATCAT |
| Product Size: | 150
|
GeneMap Primers:
| Left strand primer: | ATGTGCTGCTGTTGAAAGTT |
| Right strand primer: | CACATTTTCCCACTGATCAT |
| Product Size: | 150 |
|
