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MarkerCard for AFMa058xc5


Location

Synonyms
  • w5112
  • D19S931
  • RH31445
  • STS21079
  • AFMa058xc5
  • SHGC-21085
  • AFMa058xc5a
  • AFMa058xc5m
  • AFMa058xc5a/AFMa058xc5m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFMa058xc5 (G3 panel) from Stanford
Location (cR10,000):1001 cR
Bin 13

AFMa058xc5 (G3 panel) from GeneMap
Location (cR10,000):1012 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31445
Linkage Mapping

According to:
Entry AFMa058xc5 from Genethon
Location:48.9 cM
Heterozygosity:0.77
Number of Alleles:10
Allele Size Range:148 - 176 bp
Entry AFMa058xc5 from Marshfield
Location:49.75 cM
Heterozygosity:0.79
Allele Size Range:148 - 176 bp
STS to YAC Content Mapping

According to:
Entry AFMA058XC5 from Whitehead
YAC Contig Name:WC19.2
Sequences

According to:

Entry AFMa058xc5 from Genethon
CA strand primer:GGGTCACATGGCTAGGCTAA
GT strand primer:AGCTGTTTGCCCGCAG
Allele Size Range:148 - 176 bp
Full Sequence

Entry AFMA058XC5 from Whitehead
Left strand primer:GGGTCACATGGCTAGGCTAA
Right strand primer:AGCTGTTTGCCCGCAG
Product Size:172

Primer 1:GGGTCACATGGCTAGGCTAA
Primer 2:AGCTGTTTGCCCGCAG
Product Size:148

GeneMap Primers:
Left strand primer:GGGTCACATGGCTAGGCTAA
Right strand primer:AGCTGTTTGCCCGCAG
Product Size:148