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MarkerCard for AFMa139we9


Location

Synonyms
  • RH4511
  • D19S425
  • RH34295
  • RH42668
  • RH55675
  • RH74030
  • STS2496
  • STS11822
  • SHGC-5357
  • AFMa139we9
  • AFMa139we9a
  • AFMa139we9m
  • AFMa139we9a/AFMa139we9m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFMa139we9 (G3 panel) from Stanford
Location (cR10,000):1469 cR
Bin 26

AFMa139we9 (G3 panel) from GeneMap
Location (cR10,000):1480 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH34295
AFMa139we9 (GeneBridge 4 panel) from GeneMap
Location (cR3000):211.54 cR
Lod Score:F
Data obtained from:Genethon
Marker type:microsatellite
RHDB ID RH42668
Linkage Mapping

According to:
Entry AFMa139we9 from Genethon
Location:58.7 cM
Heterozygosity:0.86
Number of Alleles:13
Allele Size Range:252 - 280 bp
Entry AFMa139we9 from Marshfield
Location:59.36 cM
Heterozygosity:0.86
Allele Size Range:252 - 280 bp
STS to YAC Content Mapping

According to:
Entry AFMA139WE9 from Whitehead
YAC Contig Name:WC19.3
Sequences

According to:

Entry AFMa139we9 from Genethon
CA strand primer:CCACAGGTGTGCATAAAAG
GT strand primer:GCCATGTGACTGTAGCAGA
Allele Size Range:252 - 280 bp
Full Sequence

Entry AFMA139WE9 from Whitehead
Left strand primer:CCACAGGTGTGCATAAAAG
Right strand primer:GCCATGTGACTGTAGCAGA
Product Size:255

Primer 1:CCACAGGTGTGCATAAAAG
Primer 2:GCCATGTGACTGTAGCAGA
Product Size:255

GeneMap Primers:
Left strand primer:CCACAGGTGTGCATAAAAG
Right strand primer:GCCATGTGACTGTAGCAGA
Product Size:256