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MarkerCard for AFMb010xd9


Location

Synonyms
  • w3172
  • RH31373
  • RH83450
  • STS5564
  • D16S3071
  • AFMb010xd9
  • SHGC-20956
  • AFMb010xd9a
  • AFMb010xd9m
  • AFMb010xd9a/AFMb010xd9m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFMb010xd9 (G3 panel) from Stanford
Location (cR10,000):1993 cR
Bin 44

AFMb010xd9 (G3 panel) from GeneMap
Location (cR10,000):2437 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31373
Linkage Mapping

According to:
Entry AFMb010xd9 from Genethon
Location:73.5 cM
Heterozygosity:0.69
Number of Alleles:5
Allele Size Range:86 - 98 bp
Entry AFMb010xd9 from Marshfield
Location:75.34 cM
Heterozygosity:0.68
Allele Size Range:86 - 98 bp
STS to YAC Content Mapping

According to:
Entry AFMB010XD9 from Whitehead
YAC Contig Name:WC16.4
Sequences

According to:

Entry AFMb010xd9 from Genethon
CA strand primer:AGCTCTCTGATGGGCAGTG
GT strand primer:TGGAAGATAGCCCCCAAAT
Allele Size Range:86 - 98 bp
Full Sequence

Entry AFMB010XD9 from Whitehead
Left strand primer:AGCTCTCTGATGGGCAGTG
Right strand primer:TGGAAGATAGCCCCCAAAT
Product Size:96

Primer 1:AGCTCTCTGATGGGCAGTG
Primer 2:TGGAAGATAGCCCCCAAAT
Product Size:86

GeneMap Primers:
Left strand primer:AGCTCTCTGATGGGCAGTG
Right strand primer:TGGAAGATAGCCCCCAAAT
Product Size:86