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MarkerCard for AFMb285xh9


Location

Synonyms
  • w6393
  • RH31165
  • D11S4149
  • STS27220
  • AFMb285xh9
  • SHGC-20656
  • AFMb285xh9a
  • AFMb285xh9m
  • AFMb285xh9a/AFMb285xh9m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFMb285xh9 (G3 panel) from Stanford
Location (cR10,000):303 cR
Bin 14

AFMb285xh9 (G3 panel) from GeneMap
Location (cR10,000):303 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31165
Linkage Mapping

According to:
Entry AFMb285xh9 from Genethon
Location:16.8 cM
Heterozygosity:0.77
Number of Alleles:7
Allele Size Range:214 - 226 bp
Entry AFMb285xh9 from Marshfield
Location:14.52 cM
Heterozygosity:0.77
Allele Size Range:214 - 226 bp
STS to YAC Content Mapping

According to:
Entry AFMB285XH9 from Whitehead
YAC Contig Name:WC11.0
Sequences

According to:

Entry AFMb285xh9 from Genethon
CA strand primer:TGAATTATACCCCTGACCAA
GT strand primer:CCCAGCCAATATCAGCA
Allele Size Range:214 - 226 bp
Full Sequence

Entry AFMB285XH9 from Whitehead
Left strand primer:TGAATTATACCCCTGACCAA
Right strand primer:CCCAGCCAATATCAGCA
Product Size:222

Primer 1:TGAATTATACCCCTGACCAA
Primer 2:CCCAGCCAATATCAGCA
Product Size:214

GeneMap Primers:
Left strand primer:TGAATTATACCCCTGACCAA
Right strand primer:CCCAGCCAATATCAGCA
Product Size:214