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MarkerCard for AFMb332xe5


Location

Synonyms
  • w6700
  • D19S919
  • RH31446
  • RH49559
  • RH85687
  • STS17990
  • stSG17496
  • AFMb332xe5
  • SHGC-21087
  • AFMb332xe5a
  • AFMb332xe5m
  • AFMb332xe5a/AFMb332xe5m

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFMb332xe5 (G3 panel) from Stanford
Location (cR10,000):1082 cR
Bin 14

AFMb332xe5 (G3 panel) from GeneMap
Location (cR10,000):1093 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH31446
AFMb332xe5 (GeneBridge 4 panel) from GeneMap
Location (cR3000):177.07 cR
Lod Score:F
Data obtained from:Sanger Centre
Marker type:microsatellite
RHDB ID RH49559
Linkage Mapping

According to:
Entry AFMb332xe5 from Genethon
Location:50.2 cM
Heterozygosity:0.67
Number of Alleles:6
Allele Size Range:211 - 221 bp
Entry AFMb332xe5 from Marshfield
Location:50.81 cM
Heterozygosity:0.67
Allele Size Range:211 - 221 bp
STS to YAC Content Mapping

According to:
Entry AFMB332XE5 from Whitehead
YAC Contig Name:WC19.2
Sequences

According to:

Entry AFMb332xe5 from Genethon
CA strand primer:GATGACCCCAGTAATGACG
GT strand primer:GATGTGTGAATTGTACCCG
Allele Size Range:211 - 221 bp
Full Sequence

Entry AFMB332XE5 from Whitehead
Left strand primer:GATGACCCCAGTAATGACG
Right strand primer:GATGTGTGAATTGTACCCG
Product Size:215

Primer 1:GATGACCCCAGTAATGACG
Primer 2:GATGTGTGAATTGTACCCG
Product Size:211

GeneMap Primers:
Left strand primer:GATGACCCCAGTAATGACG
Right strand primer:GATGTGTGAATTGTACCCG
Product Size:221