GeneLoc Integrated Map for Chromosome 16: Search Results

# #	Location Location	Strand Strand	Gene Gene	Unigene cluster Unigene cluster	Entrez Gene Id Entrez Gene Id	Ensembl Id Ensembl Id	Description Description	Genetic Marker Genetic Marker	Marker D-number Marker D-number	Marker type Marker type
1	chr16: 51,106,685-51,106,885	+	GC16P051106
2	chr16: 51,107,571-51,108,021	+	SOD1P2 Exon structure		100652974	ENSG00000261282	superoxide dismutase 1 pseudogene 2
3	chr16: 51,120,059-51,120,363							SHGC-82541
4	chr16: 51,126,627-51,135,774	-	LOC105371253 Exon structure		105371253
5	chr16: 51,135,975-51,152,316	-	SALL1 Exon structure	Hs.135787	6299	ENSG00000103449	spalt like transcription factor 1
6	chr16: 51,136,065-51,136,213							stSG28244
7	chr16: 51,145,650-51,145,771							SHGC-9504
8	chr16: 51,149,239-51,149,819	+	ENSG00000261238 Exon structure			ENSG00000261238
9	chr16: 51,150,770-51,442,519	+	LOC105371256 Exon structure		105371256	ENSG00000285367
10	chr16: 51,176,066-51,178,898	+	ENSG00000280344 Exon structure			ENSG00000280344
11	chr16: 51,244,054-51,244,123	+	ENSG00000261047 Exon structure			ENSG00000261047
12	chr16: 51,277,852-51,279,705	+	UNGP1 Exon structure		57004	ENSG00000260818	uracil-DNA glycosylase pseudogene 1
13	chr16: 51,279,249-51,279,368							stSG34227
14	chr16: 51,336,481-51,336,721							s25F10	D16S2705
15	chr16: 51,354,456-51,525,613	-	LOC102723323 Exon structure		102723323	ENSG00000260850
16	chr16: 51,431,857-51,431,981							CHLC.GGAA20G02	D16S770	RHmkr		Polym	onYAC
17	chr16: 51,522,882-51,523,148							CHLC.ATA20H10	D16S757			Polym
18	chr16: 51,536,214-51,536,526							SHGC-146084
19	chr16: 51,541,249-51,541,474							SHGC-933
20	chr16: 51,541,251-51,541,469							AFM210yg3	D16S416	RHmkr		Polym	onYAC
21	chr16: 51,553,436-51,647,132	+	HNRNPA1P48 Exon structure		642659	ENSG00000224578	heterogeneous nuclear ribonucleoprotein A1 pseudogene 48
22	chr16: 51,555,512-51,555,539	+	PIR35026 Exon structure
23	chr16: 51,671,236-51,671,563	-	RN7SKP142 Exon structure		106480877	ENSG00000223168	RNA, 7SK small nuclear pseudogene 142
24	chr16: 51,719,080-51,767,172	-	LOC105371257 Exon structure		105371257
25	chr16: 51,757,330-51,757,598							RPCI-4-651H17T7
26	chr16: 51,762,519-51,773,173	+	LINC01571 Exon structure		101927364	ENSG00000260057	long intergenic non-protein coding RNA 1571
27	chr16: 51,821,966-51,822,241							SHGC-146133
28	chr16: 51,822,365-51,822,642							SHGC-146132
29	chr16: 51,866,217-51,866,388							s47G4	D16S2824
30	chr16: 51,868,429-51,868,713							SHGC-106676
31	chr16: 51,882,860-51,883,135							SHGC-111504
32	chr16: 51,906,498-51,906,759							SHGC-9373
33	chr16: 51,985,399-51,994,589	-	LOC105371259 Exon structure		105371259
34	chr16: 52,005,487-52,078,517	-	C16orf97 Exon structure	Hs.534669	388276	ENSG00000261190	chromosome 16 open reading frame 97
35	chr16: 52,021,310-52,021,509							s306B6	D16S2738
36	chr16: 52,023,226-52,023,345	+	GC16P052023
37	chr16: 52,075,803-52,076,021							CHLC.GATA81B12	D16S2623	RHmkr		Polym	onYAC
38	chr16: 52,078,622-52,080,489	+	ENSG00000261470 Exon structure			ENSG00000261470
39	chr16: 52,080,278-52,080,407							WI-3942		RHmkr
40	chr16: 52,081,568-52,082,096	-	ENSG00000279779 Exon structure			ENSG00000279779
41	chr16: 52,083,065-52,085,109	-	LINC00919 Exon structure	Hs.535454	100505619	ENSG00000260268	long intergenic non-protein coding RNA 919
42	chr16: 52,083,995-52,084,123							stSG47024		RHmkr	cDNA
43	chr16: 52,085,280-52,099,067	+	LINC02180 Exon structure		102467079	ENSG00000261749	long intergenic non-protein coding RNA 2180
44	chr16: 52,113,228-52,113,517							SHGC-77930
45	chr16: 52,171,730-52,172,068							SHGC-104951
46	chr16: 52,188,915-52,189,070	+	GC16P052188
47	chr16: 52,198,012-52,227,956	-	ENSG00000260975 Exon structure			ENSG00000260975
48	chr16: 52,206,866-52,207,015							WI-1256	D16S744, D16S777	RHmkr			onYAC
49	chr16: 52,209,358-52,209,588	-	GC16M052210
50	chr16: 52,220,619-52,220,794							SHGC-15296
51	chr16: 52,228,420-52,228,650							s59B10	D16S2900
52	chr16: 52,238,082-52,269,440	+	ENSG00000260478 Exon structure			ENSG00000260478
53	chr16: 52,239,680-52,269,440	+	LOC105371261 Exon structure		105371261
54	chr16: 52,258,564-52,280,638	+	CASC22 Exon structure	Hs.266768	283854	ENSG00000260887	cancer susceptibility 22
55	chr16: 52,264,776-52,265,046							SHGC-78172
56	chr16: 52,311,080-52,311,272							s21E1	D16S2700
57	chr16: 52,330,829-52,331,163							SHGC-84221
58	chr16: 52,356,759-52,356,937							WI-9897	D16S2973	RHmkr			onYAC
59	chr16: 52,410,709-52,410,887							s306H3	D16S2741
60	chr16: 52,416,790-52,419,866	+	LOC105371262 Exon structure		105371262
61	chr16: 52,425,624-52,425,709							stSG47098		RHmkr	cDNA
62	chr16: 52,436,425-52,547,802	-	TOX3 Exon structure	Hs.460789	27324	ENSG00000103460	TOX high mobility group box family member 3
63	chr16: 52,436,772-52,437,474	-	ENSG00000279427 Exon structure			ENSG00000279427
64	chr16: 52,520,772-52,521,061							SHGC-148286
65	chr16: 52,542,174-52,542,504							WI-2061	D16S783				onYAC
66	chr16: 52,544,221-52,544,563							SHGC-154410
67	chr16: 52,544,939-52,545,237							s28E6	D16S2712
68	chr16: 52,552,087-52,652,105	-	CASC16 Exon structure	Hs.662199	643714	ENSG00000249231	cancer susceptibility 16
69	chr16: 52,552,133-52,552,280							stSG63221		RHmkr	cDNA
70	chr16: 52,570,221-52,570,505							RH123373
71	chr16: 52,578,089-52,578,371							SHGC-156094
72	chr16: 52,581,252-52,588,579	+	LOC105371265 Exon structure		105371265
73	chr16: 52,582,683-52,582,789							WI-18486		RHmkr	cDNA
74	chr16: 52,590,445-52,590,615							WI-6468	D16S2950				onYAC
75	chr16: 52,598,480-52,604,318	-	GC16M052598
76	chr16: 52,607,054-52,613,908	+	LOC105371264 Exon structure		105371264	ENSG00000260963
77	chr16: 52,607,762-52,608,158	-	ENSG00000260393 Exon structure			ENSG00000260393
78	chr16: 52,622,115-52,631,088	+	ENSG00000261261 Exon structure			ENSG00000261261
79	chr16: 52,624,988-52,647,505	+	GC16P052624
80	chr16: 52,650,098-52,650,216							s4B9	D16S2829
81	chr16: 52,655,233-52,657,320	+	LOC146253 Exon structure		146253	ENSG00000234337
82	chr16: 52,670,055-52,670,347							SHGC-82509
83	chr16: 52,670,373-52,670,567							s34E11	D16S2800
84	chr16: 52,698,322-52,701,881	-	GC16M052698
85	chr16: 52,735,990-52,736,017	+	PIR40235 Exon structure
86	chr16: 52,832,503-52,832,609							WI-4863	D16S2632
87	chr16: 52,866,078-52,866,276							SHGC-84704
88	chr16: 52,883,638-52,883,823							WI-4691	D16S2987	RHmkr			onYAC
89	chr16: 52,919,450-52,919,599							AFM225zf2	D16S419	RHmkr		Polym	onYAC
90	chr16: 52,934,812-52,935,635	+	PHBP21 Exon structure		390730	ENSG00000260326	prohibitin pseudogene 21
91	chr16: 52,942,139-52,943,464	+	LOC100288763 Exon structure		100288763	ENSG00000260258
92	chr16: 52,975,953-53,052,917	-	LOC105371267 Exon structure		105371267
93	chr16: 53,010,281-53,011,296	-	LOC100128523 Exon structure		100128523
94	chr16: 53,010,395-53,011,286	-	ENSG00000260939 Exon structure			ENSG00000260939
95	chr16: 53,035,690-53,052,873	-	ENSG00000277639 Exon structure			ENSG00000277639
96	chr16: 53,054,998-53,329,150	+	CHD9 Exon structure	Hs.59159; Hs.622347	80205	ENSG00000177200	chromodomain helicase DNA binding protein 9
97	chr16: 53,085,076-53,085,093	+	GC16P053085
98	chr16: 53,106,617-53,106,890							AFMa184xg1	D16S3034			Polym	onYAC
99	chr16: 53,158,240-53,168,298	-	GC16M053158
100	chr16: 53,168,522-53,169,450	+	ENSG00000261291 Exon structure			ENSG00000261291
101	chr16: 53,205,298-53,205,496							Bdya7a03	D16S2560E
102	chr16: 53,206,068-53,206,308							embl-AA021061
103	chr16: 53,227,146-53,227,694	+	ENSG00000280227 Exon structure			ENSG00000280227
104	chr16: 53,250,831-53,250,923	-	GC16M053250
105	chr16: 53,298,167-53,301,213	-	LOC100310835 Exon structure		100310835
106	chr16: 53,298,224-53,299,794	+	LOC100421174 Exon structure		100421174	ENSG00000261056
107	chr16: 53,299,465-53,299,608							stSG52822		RHmkr	cDNA
108	chr16: 53,310,797-53,311,989	+	ENSG00000279589 Exon structure			ENSG00000279589
109	chr16: 53,313,085-53,313,225							stSG28019
110	chr16: 53,316,434-53,316,577							stSG50459		RHmkr	cDNA
111	chr16: 53,320,021-53,320,169							embl-AA011564
112	chr16: 53,326,744-53,326,847							SGC31994		RHmkr	cDNA
113	chr16: 53,334,562-53,334,664	+	ENSG00000238645 Exon structure			ENSG00000238645
114	chr16: 53,337,453-53,337,571	+	RNA5SP427 Exon structure		100873678	ENSG00000202193	RNA, 5S ribosomal pseudogene 427
115	chr16: 53,354,522-53,358,390	+	LOC100996483 Exon structure		100996483
116	chr16: 53,359,410-53,359,573							WI-4744	D16S3234	RHmkr			onYAC
117	chr16: 53,361,874-53,367,364	-	LOC101929000 Exon structure		101929000
118	chr16: 53,362,019-53,363,678	-	ENSG00000259962 Exon structure			ENSG00000259962
119	chr16: 53,362,652-53,362,687	+	PIR38337 Exon structure
120	chr16: 53,364,982-53,373,083	-	ENSG00000260078 Exon structure			ENSG00000260078
121	chr16: 53,369,362-53,371,129	-	LOC643802 Exon structure	Hs.451336	643802		U3 small nucleolar ribonucleoprotein protein MPP10-like (est)
122	chr16: 53,373,493-53,384,745	+	LOC102723373 Exon structure		102723373	ENSG00000261804
123	chr16: 53,386,944-53,389,085	+	ENSG00000262714 Exon structure			ENSG00000262714
124	chr16: 53,388,434-53,388,611							stSG53206		RHmkr	cDNA
125	chr16: 53,389,886-53,390,563	+	ENSG00000279741 Exon structure			ENSG00000279741
126	chr16: 53,391,089-53,392,473	+	ENSG00000280027 Exon structure			ENSG00000280027
127	chr16: 53,432,478-53,439,730	+	GC16P053432
128	chr16: 53,433,977-53,491,649	+	RBL2 Exon structure	Hs.513609	5934	ENSG00000103479	RB transcriptional corepressor like 2
129	chr16: 53,443,228-53,443,332	-	RNU6-1153P Exon structure		106480643	ENSG00000252569	RNA, U6 small nuclear 1153, pseudogene
130	chr16: 53,448,748-53,449,590	+	ENSG00000259926 Exon structure			ENSG00000259926
131	chr16: 53,454,796-53,454,823	+	PIR39747 Exon structure
132	chr16: 53,478,957-53,481,550	-	ENSG00000279344 Exon structure			ENSG00000279344
133	chr16: 53,481,719-53,481,850							sts-H02267
134	chr16: 53,487,607-53,489,943	-	ENSG00000279722 Exon structure			ENSG00000279722
135	chr16: 53,487,643-53,487,894							EST456895		RHmkr	cDNA
136	chr16: 53,487,764-53,487,894							stSG36045		RHmkr	cDNA
137	chr16: 53,490,340-53,490,588							SHGC-12011
138	chr16: 53,490,858-53,490,998							Bda63b12	D16S2536E	RHmkr	cDNA
139	chr16: 53,491,040-53,504,411	-	AKTIP Exon structure	Hs.380897	64400	ENSG00000166971	AKT interacting protein
140	chr16: 53,491,040-53,493,968	-	GC16M053491
141	chr16: 53,491,098-53,491,230							stSG31698		RHmkr	cDNA
142	chr16: 53,491,763-53,491,959							embl-T03419
143	chr16: 53,492,162-53,492,304							stSG51954		RHmkr	cDNA
144	chr16: 53,505,287-53,505,314	+	PIR52833 Exon structure
145	chr16: 53,510,284-53,519,535	-	LOC105371268 Exon structure		105371268
146	chr16: 53,538,905-53,538,935	+	PIR32359 Exon structure
147	chr16: 53,538,905-53,538,935	+	GC16P053538
148	chr16: 53,538,905-53,538,935	+	GC16P053540
149	chr16: 53,544,359-53,560,428	-	LOC105371269 Exon structure		105371269
150	chr16: 53,560,249-53,560,276	-	PIR49086 Exon structure
151	chr16: 53,598,153-53,703,938	-	RPGRIP1L Exon structure	Hs.298382	23322	ENSG00000103494	RPGRIP1 like
152	chr16: 53,615,257-53,615,377	+	GC16P053615
153	chr16: 53,628,256-53,628,816	-	ENSG00000275191 Exon structure			ENSG00000275191
154	chr16: 53,636,823-53,637,048							AFM205ze5	D16S415	RHmkr		Polym	onYAC
155	chr16: 53,648,492-53,648,611							SHGC-56694
156	chr16: 53,648,581-53,648,804							AFMa061yb5	D16S3137	RHmkr		Polym	onYAC
157	chr16: 53,662,210-53,662,569	+	GC16P053662
158	chr16: 53,668,831-53,669,101							RH123056
159	chr16: 53,691,388-53,691,589							WI-11251		RHmkr
160	chr16: 53,701,692-54,158,512	+	FTO Exon structure	Hs.528833	79068	ENSG00000140718	FTO, alpha-ketoglutarate dependent dioxygenase
161	chr16: 53,715,908-53,716,097							s308B5	D16S2748
162	chr16: 53,757,068-53,757,415							SHGC-149420
163	chr16: 53,775,106-53,775,396							SHGC-141218
164	chr16: 53,900,645-53,900,897							WI-22517		RHmkr	cDNA
165	chr16: 53,940,395-53,940,596							WI-4215	D16S2986	RHmkr			onYAC
166	chr16: 53,947,620-53,947,963							SHGC-84665
167	chr16: 53,968,549-53,968,702	+	GC16P053968
168	chr16: 53,981,229-53,981,912	-	ENSG00000261630 Exon structure			ENSG00000261630
169	chr16: 53,991,012-53,994,454	+	ENSG00000280392 Exon structure			ENSG00000280392
170	chr16: 53,998,313-53,999,969	-	ENSG00000260194 Exon structure			ENSG00000260194
171	chr16: 53,999,437-54,014,328	+	GC16P053999
172	chr16: 54,027,420-54,027,558							embl-AA005225
173	chr16: 54,033,997-54,054,583	-	ENSG00000261049 Exon structure			ENSG00000261049
174	chr16: 54,039,393-54,040,373	+	FTO-IT1 Exon structure	Hs.664629	100505692		FTO intronic transcript 1
175	chr16: 54,048,345-54,048,537							SHGC-52812		RHmkr	cDNA
176	chr16: 54,056,198-54,057,437	+	LOC105371271 Exon structure		105371271
177	chr16: 54,061,140-54,061,499	+	GC16P054061
178	chr16: 54,067,752-54,067,872	+	GC16P054067
179	chr16: 54,077,510-54,081,561	-	GC16M054077
180	chr16: 54,089,707-54,089,862							stSG4655		RHmkr	cDNA
181	chr16: 54,112,248-54,117,325	-	GC16M054112
182	chr16: 54,113,058-54,114,466	+	GC16P054113
183	chr16: 54,113,247-54,113,377							WI-16741		RHmkr	cDNA
184	chr16: 54,114,138-54,114,414							WI-9561	D16S2971		cDNA		onYAC
185	chr16: 54,114,231-54,114,379							Cda11d08	D16S2577E	RHmkr	cDNA
186	chr16: 54,114,697-54,114,878	-	ENSG00000280454 Exon structure			ENSG00000280454
187	chr16: 54,116,359-54,116,665							SHGC-142454
188	chr16: 54,122,586-54,123,516	-	GC16M054122
189	chr16: 54,129,772-54,130,062							UT949	D16S483
190	chr16: 54,236,788-54,236,891							s310H3	D16S2758
191	chr16: 54,239,693-54,240,654	+	ENSG00000259759 Exon structure			ENSG00000259759
192	chr16: 54,240,775-54,240,904							SHGC-57464
193	chr16: 54,245,544-54,270,879	-	LINC02169 Exon structure	Hs.232014	100996338	ENSG00000259517	long intergenic non-protein coding RNA 2169
194	chr16: 54,283,300-54,286,856	-	IRX3 Exon structure	Hs.499205	79191	ENSG00000177508	iroquois homeobox 3
195	chr16: 54,285,344-54,285,408	+	GC16P054286
196	chr16: 54,285,604-54,289,568	+	ENSG00000283689 Exon structure			ENSG00000283689
197	chr16: 54,290,965-54,292,422	+	ENSG00000277559 Exon structure			ENSG00000277559
198	chr16: 54,305,638-54,323,771	-	GC16M054305
199	chr16: 54,360,246-54,360,403	+	GC16P054360
200	chr16: 54,366,004-54,370,699	-	LINC02140 Exon structure	Hs.112680	100996345	ENSG00000261803	long intergenic non-protein coding RNA 2140
201	chr16: 54,366,176-54,366,298							stSG52132
202	chr16: 54,370,408-54,374,716	+	LOC105371272 Exon structure		105371272
203	chr16: 54,375,213-54,375,374	+	GC16P054375
204	chr16: 54,396,886-54,397,252	+	GC16P054396
205	chr16: 54,417,954-54,424,426	+	GC16P054417
206	chr16: 54,439,018-54,444,713	-	GC16M054440
207	chr16: 54,459,162-54,492,674	-	GC16M054459
208	chr16: 54,475,092-54,475,350							CHLC.GGAA23C09	D16S771	RHmkr		Polym	onYAC
209	chr16: 54,483,401-54,483,683							SHGC-147289
210	chr16: 54,493,631-54,493,901							SHGC-141984
211	chr16: 54,526,422-54,542,446	+	GC16P054526
212	chr16: 54,532,540-54,532,878							SHGC-152985
213	chr16: 54,533,630-54,533,941							SHGC-147006
214	chr16: 54,542,808-54,559,100	-	LINC02183 Exon structure		105371273	ENSG00000283304	long intergenic non-protein coding RNA 2183
215	chr16: 54,547,553-54,547,685							s42B2	D16S2818
216	chr16: 54,560,390-54,565,078	+	GC16P054560
217	chr16: 54,619,524-54,649,166	+	GC16P054619
218	chr16: 54,622,332-54,622,548							UT1936	D16S492			Polym
219	chr16: 54,628,963-54,657,662	-	ENSG00000283258 Exon structure			ENSG00000283258
220	chr16: 54,634,442-54,652,152	+	LOC105371274 Exon structure		105371274
221	chr16: 54,681,886-54,688,001	+	GC16P054681
222	chr16: 54,699,426-54,706,374	+	GC16P054699
223	chr16: 54,744,814-54,745,272	+	GC16P054745
224	chr16: 54,766,316-54,766,445							s303A8	D16S2723
225	chr16: 54,792,943-54,793,289							SHGC-85746
226	chr16: 54,845,189-54,929,189	-	CRNDE Exon structure	Hs.237396	643911	ENSG00000245694	colorectal neoplasia differentially expressed
227	chr16: 54,847,216-54,854,994	+	LOC105371276 Exon structure		105371276
228	chr16: 54,847,247-54,848,291	-	LOC101927480 Exon structure		101927480
229	chr16: 54,853,553-54,893,566	-	LOC105371275 Exon structure		105371275
230	chr16: 54,873,998-54,876,679	-	GC16M054873
231	chr16: 54,876,664-54,881,371	+	GC16P054876
232	chr16: 54,884,068-54,889,792	-	GC16M054885
233	chr16: 54,907,840-54,911,758	-	GC16M054907
234	chr16: 54,915,084-54,915,213							sts-R07176
235	chr16: 54,930,862-54,934,485	+	IRX5 Exon structure	Hs.435730	10265	ENSG00000176842	iroquois homeobox 5
236	chr16: 54,934,913-54,954,665	+	ENSG00000259711 Exon structure			ENSG00000259711
237	chr16: 54,937,786-54,938,671	-	ENSG00000259725 Exon structure			ENSG00000259725
238	chr16: 55,007,982-55,008,306	+	MTND5P34 Exon structure		107075255	ENSG00000260147	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 34
239	chr16: 55,015,192-55,015,293							SHGC-105282
240	chr16: 55,031,275-55,031,600							SHGC-154511
241	chr16: 55,042,998-55,049,302	-	LOC105371278 Exon structure		105371278
242	chr16: 55,052,386-55,052,680							SHGC-147278
243	chr16: 55,079,830-55,080,029							CHLC.GGAT1A8	D16S3255			Polym

Marker types:
RHmkr	STSs mapped on RH map
cDNA	STSs derived from cDNA
Polym	Polymorphic markers
onYAC	STSs mapped on YAC contigs

GeneLoc map region for Chromosome 16 (51,085,076 - 55,085,093 bp) around "GC16P053085"