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Display genomic neighborhood for:

gene
enhancer
genomic coordinates
Marker types:
RHmkrSTSs mapped on RH map
cDNA STSs derived from cDNA
PolymPolymorphic markers
onYACSTSs mapped on YAC contigs

   GeneLoc map region for Chromosome 16 (58,752,424 - 62,766,572 bp) around "GC16M060752"


GenesEnhancers
#
#
 Location
Location
 Strand
Strand
Gene
Gene
 Unigene cluster
Unigene cluster
 Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
 Description
Description
 Genetic Marker
Genetic Marker
 Marker D-number
Marker D-number
Marker type
Marker type
1chr16: 58,770,524-58,770,820 + RN7SL143P
Exon structure
106479273 ENSG00000244003 RNA, 7SL, cytoplasmic 143, pseudogene





2chr16: 58,776,540-58,777,563 + GEMIN8P2
Exon structure
644600 ENSG00000260451 gem nuclear organelle associated protein 8 pseudogene 2





3chr16: 58,786,823-58,786,849 + PIR49981
Exon structure









4chr16: 58,825,891-58,826,368 + RPL12P36
Exon structure
100271408 ENSG00000242423 ribosomal protein L12 pseudogene 36





5chr16: 58,847,743-58,880,381 - LOC105371296
Exon structure
105371296 ENSG00000261638






6chr16: 58,861,781-58,862,052





SHGC-143830




7chr16: 58,874,548-58,885,757 - GC16M058874









8chr16: 58,891,799-58,891,977





AFM193xh10 D16S494 RHmkr
Polym onYAC
9chr16: 58,902,678-58,903,896 + GC16P058902









10chr16: 58,912,196-58,914,422 + GC16P058912









11chr16: 58,916,060-58,916,558 + GC16P058916









12chr16: 58,916,060-58,916,558 + GC16P058917









13chr16: 58,916,060-58,916,558 + GC16P058918









14chr16: 58,918,674-58,921,284 - GC16M058918









15chr16: 58,946,496-58,950,208 + GC16P058946









16chr16: 58,956,008-58,958,232 + GC16P058956









17chr16: 58,971,884-58,976,210 - GC16M058971









18chr16: 58,984,485-58,984,616





WI-18063
RHmkr cDNA

19chr16: 58,998,892-58,999,053





MH20 D16S310



20chr16: 59,004,213-59,004,494 + ENSG00000275808
Exon structure

ENSG00000275808






21chr16: 59,037,948-59,044,235 - GC16M059037









22chr16: 59,069,049-59,069,077 + PIR62754
Exon structure









23chr16: 59,080,263-59,080,553





RH120265




24chr16: 59,088,837-59,089,091 + RPS27P27
Exon structure
100271585 ENSG00000244043 ribosomal protein S27 pseudogene 27





25chr16: 59,166,951-59,167,152 - ENSG00000261144
Exon structure

ENSG00000261144






26chr16: 59,190,960-59,190,986 - PIR32679
Exon structure









27chr16: 59,192,984-59,193,871 + GC16P059192









28chr16: 59,225,336-59,226,520 + GC16P059225









29chr16: 59,282,500-59,282,610





s65B4 D16S2864



30chr16: 59,404,810-59,463,769 - LOC105371298
Exon structure
105371298







31chr16: 59,407,148-59,409,338 + GC16P059407









32chr16: 59,479,232-59,484,482 + GC16P059479









33chr16: 59,492,687-59,493,020





SHGC-81983




34chr16: 59,540,125-59,540,266 + GC16P059540









35chr16: 59,540,126-59,540,266 + RNU4-58P
Exon structure
106481190 ENSG00000200062 RNA, U4 small nuclear 58, pseudogene





36chr16: 59,542,260-59,542,349





SHGC-10615
RHmkr


37chr16: 59,590,360-59,590,488





SHGC-148055




38chr16: 59,590,361-59,590,474





SHGC-149816




39chr16: 59,595,538-59,597,494 + GC16P059595









40chr16: 59,601,730-59,602,966 - GC16M059601









41chr16: 59,602,320-59,602,347 + PIR55544
Exon structure









42chr16: 59,605,578-59,608,225 + GC16P059605









43chr16: 59,606,028-59,618,635 - GC16M059606









44chr16: 59,608,826-59,608,857 - PIR45019
Exon structure









45chr16: 59,608,826-59,608,857 - GC16M059610









46chr16: 59,609,896-59,609,923 - PIR47733
Exon structure









47chr16: 59,611,502-59,613,916 + GC16P059611









48chr16: 59,617,600-59,620,155 - GC16M059617









49chr16: 59,629,670-59,640,178 + GC16P059629









50chr16: 59,655,412-59,657,580 + GC16P059656









51chr16: 59,655,602-59,656,336 + DUXAP11
Exon structure
106481741 ENSG00000270222 double homeobox A pseudogene 11





52chr16: 59,705,454-59,706,565 - GC16M059705









53chr16: 59,709,993-59,755,191 - APOOP5
Exon structure		 Hs.250392 644649 ENSG00000260240 apolipoprotein O pseudogene 5





54chr16: 59,715,924-59,720,384 + GC16P059715









55chr16: 59,731,354-59,731,461 + GC16P059731









56chr16: 59,765,818-59,775,206 - GC16M059765









57chr16: 59,794,153-59,794,424





SHGC-79396




58chr16: 59,794,659-59,794,836





s12H5 D16S2686



59chr16: 59,842,410-59,845,044 + GC16P059842









60chr16: 59,848,698-59,848,796





SHGC-7188




61chr16: 59,855,353-60,053,973 + LINC02141
Exon structure
101927580 ENSG00000261807 long intergenic non-protein coding RNA 2141





62chr16: 59,916,262-59,942,774 - LOC105371300
Exon structure
105371300







63chr16: 59,933,740-59,934,063





SHGC-106030




64chr16: 59,944,170-59,971,667 - LOC105371299
Exon structure
105371299







65chr16: 59,975,672-59,978,268 - GC16M059975









66chr16: 59,981,174-59,984,524 + GC16P059981









67chr16: 59,986,224-59,986,494





s308B4 D16S2747



68chr16: 59,992,706-59,995,278 + GC16P059992









69chr16: 60,007,310-60,021,294 - GC16M060007









70chr16: 60,008,583-60,008,739





WI-10708
RHmkr


71chr16: 60,024,578-60,025,141 - LOC100421258
Exon structure
100421258 ENSG00000261278






72chr16: 60,054,068-60,057,933 - GC16M060054









73chr16: 60,094,992-60,105,903 + GC16P060094









74chr16: 60,117,066-60,117,742 + GC16P060117









75chr16: 60,120,260-60,122,121 + GC16P060120









76chr16: 60,120,260-60,121,759 + GC16P060121









77chr16: 60,126,412-60,127,103 + GC16P060126









78chr16: 60,127,094-60,127,399





WI-1262 D16S745, D16S778 RHmkr

onYAC
79chr16: 60,140,752-60,148,312 + GC16P060140









80chr16: 60,173,374-60,173,845 + GC16P060173









81chr16: 60,174,294-60,177,724 - GC16M060174









82chr16: 60,181,151-60,181,232





stSG63530
RHmkr cDNA

83chr16: 60,181,598-60,190,624 + GC16P060181









84chr16: 60,198,358-60,202,046 - GC16M060198









85chr16: 60,204,088-60,206,954 + GC16P060204









86chr16: 60,217,142-60,219,807 - GC16M060217









87chr16: 60,225,704-60,225,812 + GC16P060225









88chr16: 60,290,865-60,291,029





CHLC.GATA46D08 D16S765



89chr16: 60,355,748-60,357,200 - GC16M060355









90chr16: 60,357,174-60,358,604 + GC16P060357









91chr16: 60,357,214-60,357,474 + ENSG00000261590
Exon structure

ENSG00000261590






92chr16: 60,358,455-60,359,763 - LOC729159
Exon structure
729159 ENSG00000278499






93chr16: 60,359,782-60,499,355 + LOC101927605
Exon structure
101927605 ENSG00000261436






94chr16: 60,362,102-60,364,674 + GC16P060362









95chr16: 60,374,608-60,375,197 - GC16M060374









96chr16: 60,376,512-60,386,743 + GC16P060376









97chr16: 60,378,349-60,378,697





UT481 D0S2248, D16S527

Polym
98chr16: 60,397,372-60,402,126 - GC16M060397









99chr16: 60,407,656-60,407,966





SHGC-110277




100chr16: 60,410,998-60,411,208





WI-2552 D16S785


onYAC
101chr16: 60,417,556-60,417,846 + GC16P060417









102chr16: 60,425,178-60,428,888 + GC16P060425









103chr16: 60,437,168-60,438,648 + GC16P060437









104chr16: 60,475,546-60,475,737





AFMb286wd5 D16S3089 RHmkr
Polym onYAC
105chr16: 60,486,819-60,523,250 - ENSG00000261310
Exon structure

ENSG00000261310






106chr16: 60,512,216-60,512,244 - PIR59439
Exon structure









107chr16: 60,585,496-60,588,368 - GC16M060585









108chr16: 60,599,537-60,599,852





SHGC-106027




109chr16: 60,654,071-60,656,649 - GNPATP
Exon structure
100130060 ENSG00000259844 glyceronephosphate O-acyltransferase pseudogene





110chr16: 60,661,340-60,677,644 + GC16P060661









111chr16: 60,699,620-60,705,775 + GC16P060699









112chr16: 60,706,290-60,707,690 - GC16M060706









113chr16: 60,743,864-60,744,292 + GC16P060743









114chr16: 60,752,424-60,766,572 - GC16M060752









115chr16: 60,764,607-60,764,756





SHGC-13217
RHmkr


116chr16: 60,792,484-60,792,787





SHGC-141945




117chr16: 60,834,212-60,834,324





s63C7 D16S2862



118chr16: 60,925,733-60,928,541 - ENSG00000261178
Exon structure

ENSG00000261178






119chr16: 60,934,182-60,936,862 + GC16P060934









120chr16: 60,943,098-60,958,079 - GC16M060943









121chr16: 60,949,914-60,950,672 - GC16M060949









122chr16: 60,981,602-60,989,389 + GC16P060981









123chr16: 60,986,270-60,987,058 - GC16M060987









124chr16: 60,998,482-61,000,382 + GC16P060998









125chr16: 61,042,572-61,046,312 + GC16P061042









126chr16: 61,055,399-61,055,964 - RPS27AP16
Exon structure
643358 ENSG00000224631 ribosomal protein S27a pseudogene 16





127chr16: 61,058,242-61,060,634 + GC16P061058









128chr16: 61,063,142-61,064,171 - GC16M061063









129chr16: 61,069,759-61,070,101





SHGC-85708




130chr16: 61,100,014-61,102,587 - GC16M061100









131chr16: 61,128,888-61,130,485 - GC16M061128









132chr16: 61,133,238-61,144,848 + GC16P061133









133chr16: 61,160,544-61,183,234 + GC16P061160









134chr16: 61,183,535-61,183,742





s60E7 D16S2860



135chr16: 61,198,832-61,203,613 - GC16M061198









136chr16: 61,208,558-61,208,884





RH119656




137chr16: 61,229,804-61,230,416 - LOC105371301
Exon structure
105371301







138chr16: 61,233,466-61,233,778





RH120645




139chr16: 61,257,421-61,257,606





s1A1 D16S2695



140chr16: 61,277,922-61,278,067





AFM290wc5



onYAC
141chr16: 61,290,172-61,295,867 + GC16P061290









142chr16: 61,308,574-61,313,172 + GC16P061308









143chr16: 61,324,616-61,327,486 + GC16P061324









144chr16: 61,365,504-61,447,716 + LOC105371302
Exon structure
105371302







145chr16: 61,378,814-61,379,065





WI-4823 D16S2610 RHmkr

onYAC
146chr16: 61,384,152-61,385,406 - GC16M061384









147chr16: 61,434,937-61,435,224





RH123279




148chr16: 61,456,638-61,458,951 + GC16P061456









149chr16: 61,466,042-61,466,312





RH119791




150chr16: 61,501,583-61,501,929





RH119258




151chr16: 61,503,608-61,508,371 - GC16M061503









152chr16: 61,517,930-61,518,200





SHGC-142497




153chr16: 61,535,800-61,538,302 - GC16M061535









154chr16: 61,590,338-61,590,656





SHGC-89214




155chr16: 61,593,586-61,613,072 + GC16P061593









156chr16: 61,599,718-61,689,444 - GC16M061599









157chr16: 61,622,494-61,622,711





SHGC-130518




158chr16: 61,647,242-62,037,035 - CDH8
Exon structure		 Hs.368322 1006 ENSG00000150394 cadherin 8





159chr16: 61,647,309-61,647,407





WI-14211
RHmkr cDNA

160chr16: 61,647,352-61,647,455





TIGR-A006M36
RHmkr cDNA

161chr16: 61,649,547-61,649,702 + GC16P061649









162chr16: 61,691,756-61,693,750 - ENSG00000260600
Exon structure

ENSG00000260600






163chr16: 61,695,857-61,696,108 + GC16P061695









164chr16: 61,726,536-61,726,704





SHGC-15929 D16S3337 RHmkr cDNA

165chr16: 61,739,182-61,759,180 + GC16P061739









166chr16: 61,743,154-61,743,476 - RN7SKP76
Exon structure
106481808 ENSG00000201289 RNA, 7SK small nuclear pseudogene 76





167chr16: 61,743,157-61,743,306





SHGC-32357
RHmkr cDNA

168chr16: 61,797,434-61,803,294 - GC16M061797









169chr16: 61,834,331-61,834,616





SHGC-79337




170chr16: 61,844,935-61,845,214





RH123361




171chr16: 61,888,418-61,888,447 + PIR37105
Exon structure









172chr16: 61,888,418-61,888,447 + GC16P061889









173chr16: 61,918,321-61,940,988 + LOC105371305
Exon structure
105371305 ENSG00000260115






174chr16: 61,926,594-61,926,728





WI-5943 D16S2997 RHmkr

onYAC
175chr16: 61,930,218-61,930,417





AFM212xe11



onYAC
176chr16: 61,972,492-61,972,694





D16S533 D16S533



177chr16: 61,976,925-61,977,061





sN16Y1-14 D16S2896



178chr16: 61,979,680-61,979,813





WI-15820
RHmkr cDNA

179chr16: 61,981,136-61,981,981 - GC16M061981









180chr16: 62,036,034-62,036,378





RH120002




181chr16: 62,038,023-62,038,305





RH118451




182chr16: 62,055,852-62,057,172 + GC16P062055









183chr16: 62,065,976-62,067,525 + GC16P062065









184chr16: 62,070,844-62,079,654 + GC16P062070









185chr16: 62,079,554-62,079,829





CHLC.GATA67G11 D16S2620

Polym
186chr16: 62,108,709-62,108,905





RH119956




187chr16: 62,118,038-62,127,572 - GC16M062118









188chr16: 62,119,728-62,123,479 + GC16P062119









189chr16: 62,132,820-62,134,377 + GC16P062132









190chr16: 62,155,612-62,161,803 - GC16M062155









191chr16: 62,176,086-62,176,240





SHGC-9014




192chr16: 62,178,766-62,179,061





SHGC-80975




193chr16: 62,187,539-62,187,646 - GC16M062187









194chr16: 62,187,540-62,187,646 - RNU6-21P
Exon structure
100302738 ENSG00000207441 RNA, U6 small nuclear 21, pseudogene





195chr16: 62,218,846-62,219,159





SHGC-110685




196chr16: 62,219,759-62,219,945





ms115 D16S669



197chr16: 62,224,894-62,225,563 + GC16P062224









198chr16: 62,249,650-62,250,553 + GC16P062249









199chr16: 62,250,716-62,250,746 + PIR42672
Exon structure









200chr16: 62,250,716-62,250,746 + GC16P062251









201chr16: 62,251,604-62,252,048 + GC16P062252









202chr16: 62,255,138-62,257,665 - GC16M062255









203chr16: 62,285,670-62,287,287 - GC16M062285









204chr16: 62,304,152-62,304,299





AFM330vd9 D16S514 RHmkr
Polym onYAC
205chr16: 62,304,172-62,304,292





AFM330vd9 D16S514 RHmkr
Polym onYAC
206chr16: 62,342,419-62,342,557 - GC16M062342









207chr16: 62,342,419-62,342,557 - GC16M062343









208chr16: 62,342,420-62,342,557 + ENSG00000280261
Exon structure

ENSG00000280261






209chr16: 62,353,760-62,354,534 - GC16M062353









210chr16: 62,357,371-62,357,746 + ENSG00000237901
Exon structure

ENSG00000237901






211chr16: 62,396,536-62,396,553 - GC16M062396









212chr16: 62,414,039-62,414,169





s327B11 D16S2781



213chr16: 62,420,662-62,421,070 - GC16M062420









214chr16: 62,432,799-62,433,076





SHGC-142629




215chr16: 62,494,308-62,494,639





SHGC-143873




216chr16: 62,524,505-62,524,844





SHGC-142857




217chr16: 62,596,372-62,598,449 + ENSG00000231589
Exon structure

ENSG00000231589






218chr16: 62,596,793-62,596,950





s58G9 D16S2856



219chr16: 62,644,090-62,645,370 - GC16M062644









220chr16: 62,652,350-62,653,341 - GC16M062652









221chr16: 62,679,268-62,682,241 + LOC105371306
Exon structure
105371306







222chr16: 62,686,225-62,686,479





CHLC.ATA16A05 D16S755


onYAC
223chr16: 62,699,006-62,701,734 + GC16P062699









224chr16: 62,711,294-62,711,711 - GC16M062711









225chr16: 62,711,811-62,711,838 + PIR62032
Exon structure









226chr16: 62,723,650-62,723,810 + GC16P062723









227chr16: 62,731,686-62,732,866 + GC16P062731









228chr16: 62,764,493-62,764,741





s330D1 D16S2791