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Display genomic neighborhood for:

gene
enhancer
genomic coordinates
Marker types:
RHmkrSTSs mapped on RH map
cDNA STSs derived from cDNA
PolymPolymorphic markers
onYACSTSs mapped on YAC contigs

   GeneLoc map region for Chromosome 16 (58,357,174 - 62,358,604 bp) around "GC16P060357"


GenesEnhancers
#
#
 Location
Location
 Strand
Strand
Gene
Gene
 Unigene cluster
Unigene cluster
 Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
 Description
Description
 Genetic Marker
Genetic Marker
 Marker D-number
Marker D-number
Marker type
Marker type
1chr16: 58,366,156-58,366,182 - PIR48676
Exon structure









2chr16: 58,378,051-58,378,148 - GC16M058378









3chr16: 58,378,052-58,378,148 - RNU6-269P
Exon structure
106481263 ENSG00000212379 RNA, U6 small nuclear 269, pseudogene





4chr16: 58,382,989-58,383,798 - ENSG00000261078
Exon structure

ENSG00000261078






5chr16: 58,384,442-58,384,542 - RNU6-1110P
Exon structure
106480638 ENSG00000252271 RNA, U6 small nuclear 1110, pseudogene





6chr16: 58,385,355-58,385,571





AFMa192wa9 D16S3038

Polym
7chr16: 58,392,153-58,392,807 - ENSG00000276131
Exon structure

ENSG00000276131






8chr16: 58,404,961-58,405,137





stSG31142
RHmkr cDNA

9chr16: 58,405,750-58,405,906





stSG21697




10chr16: 58,405,750-58,406,038





EST582207
RHmkr cDNA

11chr16: 58,413,428-58,413,757 + GC16P058413









12chr16: 58,418,920-58,424,047 - GC16M058420









13chr16: 58,421,326-58,462,856 + LINC02137
Exon structure
105371295 ENSG00000260186 long intergenic non-protein coding RNA 2137





14chr16: 58,423,076-58,425,939 - GC16M058423









15chr16: 58,439,918-58,442,951 - GC16M058439









16chr16: 58,446,791-58,447,019 - GC16M058446









17chr16: 58,462,846-58,513,628 + NDRG4
Exon structure		 Hs.322430 65009 ENSG00000103034 NDRG family member 4





18chr16: 58,496,907-58,497,014 + GC16P058496









19chr16: 58,496,908-58,497,014 + RNU6-103P
Exon structure
106480552 ENSG00000200556 RNA, U6 small nuclear 103, pseudogene





20chr16: 58,500,826-58,502,406 - GC16M058500









21chr16: 58,507,968-58,507,995 + PIR50383
Exon structure









22chr16: 58,512,185-58,512,311





523/524 D16S431E



23chr16: 58,512,953-58,513,153





WI-13157
RHmkr cDNA

24chr16: 58,512,955-58,513,079





WI-14098
RHmkr cDNA

25chr16: 58,513,159-58,513,374





TIGR-A002O31
RHmkr cDNA

26chr16: 58,513,181-58,513,341





IB3684




27chr16: 58,513,284-58,515,490 - GC16M058514









28chr16: 58,513,993-58,515,478 - GC16M058513









29chr16: 58,515,479-58,521,181 + SETD6
Exon structure		 Hs.731691 79918 ENSG00000103037 SET domain containing 6





30chr16: 58,516,947-58,516,975 + PIR59635
Exon structure









31chr16: 58,519,940-58,520,107





stSG9118
RHmkr cDNA

32chr16: 58,519,946-58,629,886 - CNOT1
Exon structure		 Hs.460923 23019 ENSG00000125107 CCR4-NOT transcription complex subunit 1





33chr16: 58,520,042-58,520,172





stSG4667
RHmkr cDNA

34chr16: 58,520,356-58,520,498





sts-F18216
RHmkr cDNA

35chr16: 58,520,716-58,520,920





WI-6174 D16S2941 RHmkr cDNA
onYAC
36chr16: 58,520,729-58,520,907





TIGR-A002K05
RHmkr cDNA

37chr16: 58,520,799-58,520,916





Cda01g10 D16S2562E RHmkr cDNA

38chr16: 58,520,800-58,520,968





NIB1660 D16S3186



39chr16: 58,522,970-58,523,842 + ENSG00000276259
Exon structure

ENSG00000276259






40chr16: 58,546,682-58,546,712 - PIR40366
Exon structure









41chr16: 58,546,682-58,546,712 - GC16M058546









42chr16: 58,548,498-58,548,633 - GC16M058548









43chr16: 58,548,498-58,548,633 - GC16M058549









44chr16: 58,548,499-58,548,633 - SNORA46
Exon structure		 Hs.688592 677827 ENSG00000207493 small nucleolar RNA, H/ACA box 46





45chr16: 58,554,383-58,554,610





sts-M15530




46chr16: 58,559,795-58,559,931 - GC16M058561









47chr16: 58,559,796-58,559,931 - SNORA50A
Exon structure		 Hs.677515 677830 ENSG00000281910 small nucleolar RNA, H/ACA box 50A





48chr16: 58,577,167-58,577,352





TIGR-A004F31
RHmkr cDNA

49chr16: 58,587,374-58,587,681





RH123148




50chr16: 58,597,589-58,597,945 - ENSG00000260865
Exon structure

ENSG00000260865






51chr16: 58,657,015-58,657,198





SHGC-6080
RHmkr


52chr16: 58,657,459-58,657,563





SHGC-7626




53chr16: 58,658,187-58,658,302





s317A12 D16S2769



54chr16: 58,665,109-58,685,104 - SLC38A7
Exon structure		 Hs.10499 55238 ENSG00000103042 solute carrier family 38 member 7





55chr16: 58,666,401-58,666,623





embl-T59153




56chr16: 58,666,492-58,666,622





stSG44802
RHmkr cDNA

57chr16: 58,705,799-58,706,297 - ENSG00000279889
Exon structure

ENSG00000279889






58chr16: 58,706,112-58,706,263





SHGC-1325 D16S3284 RHmkr


59chr16: 58,707,131-58,734,357 - GOT2
Exon structure		 Hs.599470 2806 ENSG00000125166 glutamic-oxaloacetic transaminase 2





60chr16: 58,707,201-58,707,322





Bdy44e12 D16S2550E



61chr16: 58,707,373-58,707,447





755/756 D0S833E, D16S427E



62chr16: 58,728,596-58,728,676 - RNY5P9
Exon structure
100169836
RNA, Ro-associated Y5 pseudogene 9





63chr16: 58,732,367-58,732,450 - GC16M058732









64chr16: 58,733,912-59,108,974 + ENSG00000245768
Exon structure

ENSG00000245768






65chr16: 58,744,250-58,744,357 - GC16M058744









66chr16: 58,744,251-58,744,357 - RNU6-1155P
Exon structure
106481544 ENSG00000200424 RNA, U6 small nuclear 1155, pseudogene





67chr16: 58,770,524-58,770,820 + RN7SL143P
Exon structure
106479273 ENSG00000244003 RNA, 7SL, cytoplasmic 143, pseudogene





68chr16: 58,776,540-58,777,563 + GEMIN8P2
Exon structure
644600 ENSG00000260451 gem nuclear organelle associated protein 8 pseudogene 2





69chr16: 58,786,823-58,786,849 + PIR49981
Exon structure









70chr16: 58,825,891-58,826,368 + RPL12P36
Exon structure
100271408 ENSG00000242423 ribosomal protein L12 pseudogene 36





71chr16: 58,847,743-58,880,381 - LOC105371296
Exon structure
105371296 ENSG00000261638






72chr16: 58,861,781-58,862,052





SHGC-143830




73chr16: 58,874,548-58,885,757 - GC16M058874









74chr16: 58,891,799-58,891,977





AFM193xh10 D16S494 RHmkr
Polym onYAC
75chr16: 58,902,678-58,903,896 + GC16P058902









76chr16: 58,912,196-58,914,422 + GC16P058912









77chr16: 58,916,060-58,916,558 + GC16P058916









78chr16: 58,916,060-58,916,558 + GC16P058917









79chr16: 58,916,060-58,916,558 + GC16P058918









80chr16: 58,918,674-58,921,284 - GC16M058918









81chr16: 58,946,496-58,950,208 + GC16P058946









82chr16: 58,956,008-58,958,232 + GC16P058956









83chr16: 58,971,884-58,976,210 - GC16M058971









84chr16: 58,984,485-58,984,616





WI-18063
RHmkr cDNA

85chr16: 58,998,892-58,999,053





MH20 D16S310



86chr16: 59,004,213-59,004,494 + ENSG00000275808
Exon structure

ENSG00000275808






87chr16: 59,037,948-59,044,235 - GC16M059037









88chr16: 59,069,049-59,069,077 + PIR62754
Exon structure









89chr16: 59,080,263-59,080,553





RH120265




90chr16: 59,088,837-59,089,091 + RPS27P27
Exon structure
100271585 ENSG00000244043 ribosomal protein S27 pseudogene 27





91chr16: 59,166,951-59,167,152 - ENSG00000261144
Exon structure

ENSG00000261144






92chr16: 59,190,960-59,190,986 - PIR32679
Exon structure









93chr16: 59,192,984-59,193,871 + GC16P059192









94chr16: 59,225,336-59,226,520 + GC16P059225









95chr16: 59,282,500-59,282,610





s65B4 D16S2864



96chr16: 59,404,810-59,463,769 - LOC105371298
Exon structure
105371298







97chr16: 59,407,148-59,409,338 + GC16P059407









98chr16: 59,479,232-59,484,482 + GC16P059479









99chr16: 59,492,687-59,493,020





SHGC-81983




100chr16: 59,540,125-59,540,266 + GC16P059540









101chr16: 59,540,126-59,540,266 + RNU4-58P
Exon structure
106481190 ENSG00000200062 RNA, U4 small nuclear 58, pseudogene





102chr16: 59,542,260-59,542,349





SHGC-10615
RHmkr


103chr16: 59,590,360-59,590,488





SHGC-148055




104chr16: 59,590,361-59,590,474





SHGC-149816




105chr16: 59,595,538-59,597,494 + GC16P059595









106chr16: 59,601,730-59,602,966 - GC16M059601









107chr16: 59,602,320-59,602,347 + PIR55544
Exon structure









108chr16: 59,605,578-59,608,225 + GC16P059605









109chr16: 59,606,028-59,618,635 - GC16M059606









110chr16: 59,608,826-59,608,857 - PIR45019
Exon structure









111chr16: 59,608,826-59,608,857 - GC16M059610









112chr16: 59,609,896-59,609,923 - PIR47733
Exon structure









113chr16: 59,611,502-59,613,916 + GC16P059611









114chr16: 59,617,600-59,620,155 - GC16M059617









115chr16: 59,629,670-59,640,178 + GC16P059629









116chr16: 59,655,412-59,657,580 + GC16P059656









117chr16: 59,655,602-59,656,336 + DUXAP11
Exon structure
106481741 ENSG00000270222 double homeobox A pseudogene 11





118chr16: 59,705,454-59,706,565 - GC16M059705









119chr16: 59,709,993-59,755,191 - APOOP5
Exon structure		 Hs.250392 644649 ENSG00000260240 apolipoprotein O pseudogene 5





120chr16: 59,715,924-59,720,384 + GC16P059715









121chr16: 59,731,354-59,731,461 + GC16P059731









122chr16: 59,765,818-59,775,206 - GC16M059765









123chr16: 59,794,153-59,794,424





SHGC-79396




124chr16: 59,794,659-59,794,836





s12H5 D16S2686



125chr16: 59,842,410-59,845,044 + GC16P059842









126chr16: 59,848,698-59,848,796





SHGC-7188




127chr16: 59,855,353-60,053,973 + LINC02141
Exon structure
101927580 ENSG00000261807 long intergenic non-protein coding RNA 2141





128chr16: 59,916,262-59,942,774 - LOC105371300
Exon structure
105371300







129chr16: 59,933,740-59,934,063





SHGC-106030




130chr16: 59,944,170-59,971,667 - LOC105371299
Exon structure
105371299







131chr16: 59,975,672-59,978,268 - GC16M059975









132chr16: 59,981,174-59,984,524 + GC16P059981









133chr16: 59,986,224-59,986,494





s308B4 D16S2747



134chr16: 59,992,706-59,995,278 + GC16P059992









135chr16: 60,007,310-60,021,294 - GC16M060007









136chr16: 60,008,583-60,008,739





WI-10708
RHmkr


137chr16: 60,024,578-60,025,141 - LOC100421258
Exon structure
100421258 ENSG00000261278






138chr16: 60,054,068-60,057,933 - GC16M060054









139chr16: 60,094,992-60,105,903 + GC16P060094









140chr16: 60,117,066-60,117,742 + GC16P060117









141chr16: 60,120,260-60,122,121 + GC16P060120









142chr16: 60,120,260-60,121,759 + GC16P060121









143chr16: 60,126,412-60,127,103 + GC16P060126









144chr16: 60,127,094-60,127,399





WI-1262 D16S745, D16S778 RHmkr

onYAC
145chr16: 60,140,752-60,148,312 + GC16P060140









146chr16: 60,173,374-60,173,845 + GC16P060173









147chr16: 60,174,294-60,177,724 - GC16M060174









148chr16: 60,181,151-60,181,232





stSG63530
RHmkr cDNA

149chr16: 60,181,598-60,190,624 + GC16P060181









150chr16: 60,198,358-60,202,046 - GC16M060198









151chr16: 60,204,088-60,206,954 + GC16P060204









152chr16: 60,217,142-60,219,807 - GC16M060217









153chr16: 60,225,704-60,225,812 + GC16P060225









154chr16: 60,290,865-60,291,029





CHLC.GATA46D08 D16S765



155chr16: 60,355,748-60,357,200 - GC16M060355









156chr16: 60,357,174-60,358,604 + GC16P060357









157chr16: 60,357,214-60,357,474 + ENSG00000261590
Exon structure

ENSG00000261590






158chr16: 60,358,455-60,359,763 - LOC729159
Exon structure
729159 ENSG00000278499






159chr16: 60,359,782-60,499,355 + LOC101927605
Exon structure
101927605 ENSG00000261436






160chr16: 60,362,102-60,364,674 + GC16P060362









161chr16: 60,374,608-60,375,197 - GC16M060374









162chr16: 60,376,512-60,386,743 + GC16P060376









163chr16: 60,378,349-60,378,697





UT481 D0S2248, D16S527

Polym
164chr16: 60,397,372-60,402,126 - GC16M060397









165chr16: 60,407,656-60,407,966





SHGC-110277




166chr16: 60,410,998-60,411,208





WI-2552 D16S785


onYAC
167chr16: 60,417,556-60,417,846 + GC16P060417









168chr16: 60,425,178-60,428,888 + GC16P060425









169chr16: 60,437,168-60,438,648 + GC16P060437









170chr16: 60,475,546-60,475,737





AFMb286wd5 D16S3089 RHmkr
Polym onYAC
171chr16: 60,486,819-60,523,250 - ENSG00000261310
Exon structure

ENSG00000261310






172chr16: 60,512,216-60,512,244 - PIR59439
Exon structure









173chr16: 60,585,496-60,588,368 - GC16M060585









174chr16: 60,599,537-60,599,852





SHGC-106027




175chr16: 60,654,071-60,656,649 - GNPATP
Exon structure
100130060 ENSG00000259844 glyceronephosphate O-acyltransferase pseudogene





176chr16: 60,661,340-60,677,644 + GC16P060661









177chr16: 60,699,620-60,705,775 + GC16P060699









178chr16: 60,706,290-60,707,690 - GC16M060706









179chr16: 60,743,864-60,744,292 + GC16P060743









180chr16: 60,752,424-60,766,572 - GC16M060752









181chr16: 60,764,607-60,764,756





SHGC-13217
RHmkr


182chr16: 60,792,484-60,792,787





SHGC-141945




183chr16: 60,834,212-60,834,324





s63C7 D16S2862



184chr16: 60,925,733-60,928,541 - ENSG00000261178
Exon structure

ENSG00000261178






185chr16: 60,934,182-60,936,862 + GC16P060934









186chr16: 60,943,098-60,958,079 - GC16M060943









187chr16: 60,949,914-60,950,672 - GC16M060949









188chr16: 60,981,602-60,989,389 + GC16P060981









189chr16: 60,986,270-60,987,058 - GC16M060987









190chr16: 60,998,482-61,000,382 + GC16P060998









191chr16: 61,042,572-61,046,312 + GC16P061042









192chr16: 61,055,399-61,055,964 - RPS27AP16
Exon structure
643358 ENSG00000224631 ribosomal protein S27a pseudogene 16





193chr16: 61,058,242-61,060,634 + GC16P061058









194chr16: 61,063,142-61,064,171 - GC16M061063









195chr16: 61,069,759-61,070,101





SHGC-85708




196chr16: 61,100,014-61,102,587 - GC16M061100









197chr16: 61,128,888-61,130,485 - GC16M061128









198chr16: 61,133,238-61,144,848 + GC16P061133









199chr16: 61,160,544-61,183,234 + GC16P061160









200chr16: 61,183,535-61,183,742





s60E7 D16S2860



201chr16: 61,198,832-61,203,613 - GC16M061198









202chr16: 61,208,558-61,208,884





RH119656




203chr16: 61,229,804-61,230,416 - LOC105371301
Exon structure
105371301







204chr16: 61,233,466-61,233,778





RH120645




205chr16: 61,257,421-61,257,606





s1A1 D16S2695



206chr16: 61,277,922-61,278,067





AFM290wc5



onYAC
207chr16: 61,290,172-61,295,867 + GC16P061290









208chr16: 61,308,574-61,313,172 + GC16P061308









209chr16: 61,324,616-61,327,486 + GC16P061324









210chr16: 61,365,504-61,447,716 + LOC105371302
Exon structure
105371302







211chr16: 61,378,814-61,379,065





WI-4823 D16S2610 RHmkr

onYAC
212chr16: 61,384,152-61,385,406 - GC16M061384









213chr16: 61,434,937-61,435,224





RH123279




214chr16: 61,456,638-61,458,951 + GC16P061456









215chr16: 61,466,042-61,466,312





RH119791




216chr16: 61,501,583-61,501,929





RH119258




217chr16: 61,503,608-61,508,371 - GC16M061503









218chr16: 61,517,930-61,518,200





SHGC-142497




219chr16: 61,535,800-61,538,302 - GC16M061535









220chr16: 61,590,338-61,590,656





SHGC-89214




221chr16: 61,593,586-61,613,072 + GC16P061593









222chr16: 61,599,718-61,689,444 - GC16M061599









223chr16: 61,622,494-61,622,711





SHGC-130518




224chr16: 61,647,242-62,037,035 - CDH8
Exon structure		 Hs.368322 1006 ENSG00000150394 cadherin 8





225chr16: 61,647,309-61,647,407





WI-14211
RHmkr cDNA

226chr16: 61,647,352-61,647,455





TIGR-A006M36
RHmkr cDNA

227chr16: 61,649,547-61,649,702 + GC16P061649









228chr16: 61,691,756-61,693,750 - ENSG00000260600
Exon structure

ENSG00000260600






229chr16: 61,695,857-61,696,108 + GC16P061695









230chr16: 61,726,536-61,726,704





SHGC-15929 D16S3337 RHmkr cDNA

231chr16: 61,739,182-61,759,180 + GC16P061739









232chr16: 61,743,154-61,743,476 - RN7SKP76
Exon structure
106481808 ENSG00000201289 RNA, 7SK small nuclear pseudogene 76





233chr16: 61,743,157-61,743,306





SHGC-32357
RHmkr cDNA

234chr16: 61,797,434-61,803,294 - GC16M061797









235chr16: 61,834,331-61,834,616





SHGC-79337




236chr16: 61,844,935-61,845,214





RH123361




237chr16: 61,888,418-61,888,447 + PIR37105
Exon structure









238chr16: 61,888,418-61,888,447 + GC16P061889









239chr16: 61,918,321-61,940,988 + LOC105371305
Exon structure
105371305 ENSG00000260115






240chr16: 61,926,594-61,926,728





WI-5943 D16S2997 RHmkr

onYAC
241chr16: 61,930,218-61,930,417





AFM212xe11



onYAC
242chr16: 61,972,492-61,972,694





D16S533 D16S533



243chr16: 61,976,925-61,977,061





sN16Y1-14 D16S2896



244chr16: 61,979,680-61,979,813





WI-15820
RHmkr cDNA

245chr16: 61,981,136-61,981,981 - GC16M061981









246chr16: 62,036,034-62,036,378





RH120002




247chr16: 62,038,023-62,038,305





RH118451




248chr16: 62,055,852-62,057,172 + GC16P062055









249chr16: 62,065,976-62,067,525 + GC16P062065









250chr16: 62,070,844-62,079,654 + GC16P062070









251chr16: 62,079,554-62,079,829





CHLC.GATA67G11 D16S2620

Polym
252chr16: 62,108,709-62,108,905





RH119956




253chr16: 62,118,038-62,127,572 - GC16M062118









254chr16: 62,119,728-62,123,479 + GC16P062119









255chr16: 62,132,820-62,134,377 + GC16P062132









256chr16: 62,155,612-62,161,803 - GC16M062155









257chr16: 62,176,086-62,176,240





SHGC-9014




258chr16: 62,178,766-62,179,061





SHGC-80975




259chr16: 62,187,539-62,187,646 - GC16M062187









260chr16: 62,187,540-62,187,646 - RNU6-21P
Exon structure
100302738 ENSG00000207441 RNA, U6 small nuclear 21, pseudogene





261chr16: 62,218,846-62,219,159





SHGC-110685




262chr16: 62,219,759-62,219,945





ms115 D16S669



263chr16: 62,224,894-62,225,563 + GC16P062224









264chr16: 62,249,650-62,250,553 + GC16P062249









265chr16: 62,250,716-62,250,746 + PIR42672
Exon structure









266chr16: 62,250,716-62,250,746 + GC16P062251









267chr16: 62,251,604-62,252,048 + GC16P062252









268chr16: 62,255,138-62,257,665 - GC16M062255









269chr16: 62,285,670-62,287,287 - GC16M062285









270chr16: 62,304,152-62,304,299





AFM330vd9 D16S514 RHmkr
Polym onYAC
271chr16: 62,304,172-62,304,292





AFM330vd9 D16S514 RHmkr
Polym onYAC
272chr16: 62,342,419-62,342,557 - GC16M062342









273chr16: 62,342,419-62,342,557 - GC16M062343









274chr16: 62,342,420-62,342,557 + ENSG00000280261
Exon structure

ENSG00000280261






275chr16: 62,353,760-62,354,534 - GC16M062353









276chr16: 62,357,371-62,357,746 + ENSG00000237901
Exon structure

ENSG00000237901