GeneLoc Integrated Map for Chromosome 11: Search Results

# #	Location Location	Strand Strand	Gene Gene	Unigene cluster Unigene cluster	Entrez Gene Id Entrez Gene Id	Ensembl Id Ensembl Id	Description Description	Genetic Marker Genetic Marker	Marker D-number Marker D-number	Marker type Marker type
1	chr11: 20,118,333-20,118,467							stSG44965		RHmkr	cDNA
2	chr11: 20,118,448-20,118,575							SHGC-33456		RHmkr	cDNA
3	chr11: 20,119,242-20,119,268	+	PIR54389 Exon structure
4	chr11: 20,119,650-20,119,770							sts-R52158		RHmkr	cDNA
5	chr11: 20,119,684-20,120,632	-	NAV2-AS1 Exon structure		100874015	ENSG00000254894	NAV2 antisense RNA 1
6	chr11: 20,121,401-20,121,524							stSG31943		RHmkr	cDNA
7	chr11: 20,131,730-20,135,465	+	ENSG00000279266 Exon structure			ENSG00000279266
8	chr11: 20,133,631-20,135,465	+	GC11P020133
9	chr11: 20,135,465-20,135,659							SHGC-151025
10	chr11: 20,135,469-20,135,749							AFM234wh12	D11S928	RHmkr		Polym	onYAC
11	chr11: 20,135,484-20,135,655							stSG766	D11S928	RHmkr		Polym	onYAC
12	chr11: 20,135,484-20,135,613							SHGC-972	D11S928				onYAC
13	chr11: 20,156,155-20,160,613	-	DBX1 Exon structure	Hs.558604	120237	ENSG00000109851	developing brain homeobox 1
14	chr11: 20,187,503-20,199,929	+	LOC105376583 Exon structure		105376583
15	chr11: 20,231,987-20,232,267							SHGC-150851
16	chr11: 20,232,070-20,232,328							AFM210yb8	D11S1755	RHmkr		Polym	onYAC
17	chr11: 20,319,932-20,335,849	+	GC11P020319
18	chr11: 20,356,624-20,356,912							SHGC-141312
19	chr11: 20,361,212-20,361,243	+	GC11P020361
20	chr11: 20,363,685-20,383,783	+	HTATIP2 Exon structure	Hs.90753	10553	ENSG00000109854	HIV-1 Tat interactive protein 2
21	chr11: 20,383,624-20,383,763							SHGC-17402
22	chr11: 20,387,530-20,509,333	+	PRMT3 Exon structure	Hs.152337	10196	ENSG00000185238	protein arginine methyltransferase 3
23	chr11: 20,409,613-20,409,814							AFM337tf1	D11S4190			Polym
24	chr11: 20,424,736-20,424,857							SHGC-14727	D11S4671	RHmkr
25	chr11: 20,444,181-20,444,360							cSRL-6c8	D11S1233
26	chr11: 20,508,633-20,508,727							stSG39520		RHmkr	cDNA
27	chr11: 20,511,310-20,511,483							STS1-cSRL-31b4	D11S3683
28	chr11: 20,560,068-20,572,998	-	LOC105376584 Exon structure		105376584
29	chr11: 20,574,182-20,575,363	+	HMGB1P40 Exon structure		100506595	ENSG00000255291	high mobility group box 1 pseudogene 40
30	chr11: 20,584,584-20,584,614	+	PIR46720 Exon structure
31	chr11: 20,584,584-20,584,614	+	GC11P020586
32	chr11: 20,599,400-20,659,285	+	SLC6A5 Exon structure	Hs.136557	9152	ENSG00000165970	solute carrier family 6 member 5
33	chr11: 20,608,774-20,609,021							AFMa272ze9	D11S4114			Polym
34	chr11: 20,608,775-20,609,054							SHGC-150389
35	chr11: 20,610,158-20,618,539	+	GC11P020610
36	chr11: 20,622,187-20,622,491							SHGC-145762
37	chr11: 20,638,174-20,760,534	+	GC11P020638
38	chr11: 20,656,168-20,656,443							STS1-cSRL-180c12	D11S3309
39	chr11: 20,669,551-21,575,686	+	NELL1 Exon structure	Hs.657172	4745	ENSG00000165973	neural EGFL like 1
40	chr11: 20,670,354-20,672,328	-	LOC105376586 Exon structure		105376586	ENSG00000254906
41	chr11: 20,675,977-20,676,277							STS1-cSRL-29g10	D11S3635
42	chr11: 20,682,866-20,763,045	+	GC11P020682
43	chr11: 20,682,866-20,763,045	+	GC11P020683
44	chr11: 20,780,661-20,780,783							cSRL-4b5	D11S1114
45	chr11: 20,863,529-20,863,563	+	GC11P020863
46	chr11: 20,880,672-20,926,897	-	LOC105376585 Exon structure		105376585
47	chr11: 20,883,873-20,884,040							WI-7477	D11S4434				onYAC
48	chr11: 21,000,880-21,000,997	-	GC11M021000
49	chr11: 21,000,881-21,000,997	-	RNA5SP336 Exon structure		100873599	ENSG00000201059	RNA, 5S ribosomal pseudogene 336
50	chr11: 21,048,505-21,048,802							SHGC-147500
51	chr11: 21,074,410-21,074,741							SHGC-142292
52	chr11: 21,103,794-21,162,603	+	GC11P021103
53	chr11: 21,123,736-21,123,927							RH121799
54	chr11: 21,137,346-21,137,683							RH121244
55	chr11: 21,137,437-21,137,763							RH121245
56	chr11: 21,160,944-21,161,130							MS58(CA)/MS58(GT)	D11S1246
57	chr11: 21,169,748-21,170,137	+	ENSG00000254816 Exon structure			ENSG00000254816
58	chr11: 21,204,700-21,207,147	-	GC11M021204
59	chr11: 21,260,061-21,262,570	-	ENSG00000255167 Exon structure			ENSG00000255167
60	chr11: 21,260,142-21,260,288							stSG47840		RHmkr	cDNA
61	chr11: 21,261,700-21,261,878							WI-4644	D11S4027				onYAC
62	chr11: 21,280,918-21,345,190	-	GC11M021280
63	chr11: 21,283,414-21,283,691							SHGC-110355
64	chr11: 21,283,779-21,284,955	+	ENSG00000225477 Exon structure			ENSG00000225477
65	chr11: 21,283,781-21,284,939	+	LOC100631258 Exon structure		100631258
66	chr11: 21,332,808-21,332,986							WI-3365	D11S4002				onYAC
67	chr11: 21,383,801-21,383,909	-	RNA5SP337 Exon structure		100873600	ENSG00000252816	RNA, 5S ribosomal pseudogene 337
68	chr11: 21,413,157-21,413,470							SHGC-156005
69	chr11: 21,427,272-21,427,600							SHGC-148001
70	chr11: 21,427,425-21,427,759							SHGC-145911
71	chr11: 21,428,993-21,429,332							SHGC-154293
72	chr11: 21,429,308-21,429,586							RH122207
73	chr11: 21,439,816-21,440,088							SHGC-81017
74	chr11: 21,459,143-21,459,278							SHGC-19224
75	chr11: 21,463,190-21,463,527							SHGC-155490
76	chr11: 21,479,705-21,479,910							STS1-cSRL-22e1	D11S3509
77	chr11: 21,575,430-21,575,533							TIGR-A006T21		RHmkr	cDNA
78	chr11: 21,578,795-21,578,969							AffySTS000006
79	chr11: 21,578,836-21,578,969							SHGC-130593
80	chr11: 21,588,174-21,606,486	+	GC11P021588
81	chr11: 21,615,718-21,620,979	-	GC11M021615
82	chr11: 21,622,610-21,623,667	-	GC11M021622
83	chr11: 21,629,432-21,634,413	-	GC11M021629
84	chr11: 21,640,142-21,653,776	+	GC11P021640
85	chr11: 21,645,696-21,691,695	-	GC11M021645
86	chr11: 21,667,085-21,667,221							WI-3736	D11S4009	RHmkr			onYAC
87	chr11: 21,725,893-21,726,037							1114/1115	D11S989			Polym
88	chr11: 21,735,352-21,788,908	+	GC11P021735
89	chr11: 21,738,072-21,759,082	+	GC11P021738
90	chr11: 21,753,593-22,121,531	+	LOC102723370 Exon structure		102723370
91	chr11: 21,759,737-21,760,034							STS1-cSRL-168f10	D11S3235
92	chr11: 21,779,037-21,779,330							SHGC-110794
93	chr11: 21,789,866-21,804,984	-	GC11M021789
94	chr11: 21,794,286-21,794,464							STS1-cSRL-45a6	D11S3150
95	chr11: 21,843,427-21,843,714							SHGC-82977
96	chr11: 21,875,040-21,876,242	+	GC11P021875
97	chr11: 21,884,116-21,886,549	+	GC11P021884
98	chr11: 21,902,662-21,902,964							SHGC-142711
99	chr11: 21,912,503-21,932,735	+	LOC105376587 Exon structure		105376587
100	chr11: 21,920,962-21,921,170							AFM106xd10	D11S1759			Polym
101	chr11: 22,082,247-22,082,409							STS1-cSRL-24a7-uA/cSRL-24a7-uZ
102	chr11: 22,113,448-22,117,001	+	ENSG00000254820 Exon structure			ENSG00000254820
103	chr11: 22,115,335-22,115,538							cSRL-5a7	D11S1162
104	chr11: 22,192,513-22,283,367	+	ANO5 Exon structure	Hs.154329	203859	ENSG00000171714	anoctamin 5
105	chr11: 22,201,670-22,201,920							cSRL-4c2	D11S1120
106	chr11: 22,212,552-22,212,822							SHGC-110910
107	chr11: 22,257,256-22,323,013	+	GC11P022257
108	chr11: 22,261,209-22,262,256	-	ENSG00000255372 Exon structure			ENSG00000255372
109	chr11: 22,280,367-22,280,521							stSG46167		RHmkr	cDNA
110	chr11: 22,282,001-22,282,184							stSG35952		RHmkr	cDNA
111	chr11: 22,282,952-22,283,139							stSG53168		RHmkr	cDNA
112	chr11: 22,283,730-22,338,245	-	ENSG00000254768 Exon structure			ENSG00000254768
113	chr11: 22,292,512-22,294,688	+	GC11P022292
114	chr11: 22,317,714-22,317,752	+	GC11P022317
115	chr11: 22,321,756-22,321,956							WI-5235	D11S4035	RHmkr			onYAC
116	chr11: 22,326,342-22,330,394	-	GC11M022326
117	chr11: 22,338,097-22,379,503	+	SLC17A6 Exon structure	Hs.242821	57084	ENSG00000091664	solute carrier family 17 member 6
118	chr11: 22,340,248-22,340,465							cSRL-7d11	D11S2049
119	chr11: 22,361,213-22,362,294	-	ENSG00000254540 Exon structure			ENSG00000254540
120	chr11: 22,418,395-22,418,626							AFM347tc5	D11S1359	RHmkr		Polym	onYAC
121	chr11: 22,418,451-22,418,598							AFM347tc5	D11S1359	RHmkr		Polym	onYAC
122	chr11: 22,445,672-22,492,019	-	LINC01495 Exon structure		102723378	ENSG00000255323	long intergenic non-protein coding RNA 1495
123	chr11: 22,447,298-22,447,462							cSRL-4a6	D11S1106
124	chr11: 22,470,751-22,471,054							RH120475
125	chr11: 22,481,219-22,481,489							SHGC-110042
126	chr11: 22,489,532-22,491,469	+	LOC105376589 Exon structure		105376589
127	chr11: 22,492,112-22,510,387	+	LOC105376588 Exon structure		105376588	ENSG00000255357
128	chr11: 22,499,673-22,500,018							SHGC-110153
129	chr11: 22,507,048-22,509,159	-	GC11M022507
130	chr11: 22,622,519-22,626,787	-	FANCF Exon structure	Hs.632151	2188	ENSG00000183161	FA complementation group F
131	chr11: 22,623,066-22,623,190							WI-13404		RHmkr	cDNA
132	chr11: 22,623,107-22,623,240							stSG40907		RHmkr	cDNA
133	chr11: 22,624,593-22,624,744							stSG4517		RHmkr	cDNA
134	chr11: 22,625,642-22,813,055	+	GAS2 Exon structure	Hs.711297	2620	ENSG00000148935	growth arrest specific 2
135	chr11: 22,625,843-22,628,607	+	GC11P022625
136	chr11: 22,655,217-22,655,362							sts-H93081		RHmkr	cDNA
137	chr11: 22,688,351-22,688,435	+	RNA5SP338 Exon structure		100873601	ENSG00000222427	RNA, 5S ribosomal pseudogene 338
138	chr11: 22,693,397-22,693,742							SHGC-105087
139	chr11: 22,726,098-22,726,368							RH121950
140	chr11: 22,726,400-22,727,281	+	GC11P022726
141	chr11: 22,744,580-22,746,868	+	GC11P022744
142	chr11: 22,801,232-22,801,410							sts-H59829
143	chr11: 22,811,712-22,811,983							GAS2.PCR1
144	chr11: 22,813,799-22,830,299	-	SVIP Exon structure	Hs.349096	258010	ENSG00000198168	small VCP interacting protein
145	chr11: 22,813,867-22,814,006							SHGC-15780	D11S4696
146	chr11: 22,820,631-22,820,757							SHGC-33590		RHmkr	cDNA
147	chr11: 22,820,662-22,820,772							SHGC-64301
148	chr11: 22,820,663-22,820,804							sts-T85174
149	chr11: 22,820,720-22,820,834							A009C18		RHmkr	cDNA
150	chr11: 22,820,720-22,820,834							A009C18		RHmkr	cDNA
151	chr11: 22,821,200-22,821,349							WI-13884		RHmkr	cDNA
152	chr11: 22,821,209-22,821,418							TIGR-A006S18		RHmkr	cDNA
153	chr11: 22,821,328-22,821,447							575/576	D0S1790E, D11S947E	RHmkr	cDNA
154	chr11: 22,829,380-22,945,393	+	ENSG00000246225 Exon structure			ENSG00000246225
155	chr11: 22,832,402-22,832,627	+	GC11P022832
156	chr11: 22,832,728-22,833,193	+	GC11P022833
157	chr11: 22,834,638-22,834,672	-	GC11M022834
158	chr11: 22,838,844-22,839,129	+	GC11P022838
159	chr11: 22,840,152-22,840,181	+	PIR46936 Exon structure
160	chr11: 22,846,922-22,860,486	-	CCDC179 Exon structure	Hs.555029	100500938	ENSG00000255359	coiled-coil domain containing 179
161	chr11: 22,894,301-22,894,572							SHGC-82670
162	chr11: 22,905,068-22,905,214							cSRL-5b7	D11S1165
163	chr11: 23,023,111-23,023,393							RH122202
164	chr11: 23,099,910-23,099,996	+	GC11P023099
165	chr11: 23,108,258-23,108,507							WI-4384	D11S4024				onYAC
166	chr11: 23,116,579-23,163,139	+	LOC105376591 Exon structure		105376591
167	chr11: 23,122,385-23,122,574							SHGC-14419
168	chr11: 23,161,716-23,165,414	+	GC11P023162
169	chr11: 23,162,243-23,162,482							sts-R70805
170	chr11: 23,163,563-23,203,161	+	LOC105376592 Exon structure		105376592	ENSG00000255418
171	chr11: 23,203,824-23,204,002							WI-3153	D11S3998	RHmkr			onYAC
172	chr11: 23,292,106-23,307,715	-	GC11M023292
173	chr11: 23,370,116-23,377,701	-	LOC100131557 Exon structure		100131557	ENSG00000271491
174	chr11: 23,403,805-23,406,103	+	WIZP1 Exon structure		645598	ENSG00000255293	widely interspaced zinc finger motifs pseudogene 1
175	chr11: 23,415,800-23,416,008							RH119566
176	chr11: 23,416,564-23,416,898							cSRL-5g9	D11S1206
177	chr11: 23,419,105-23,419,190	-	MIR8054 Exon structure		102465860	ENSG00000275868	microRNA 8054
178	chr11: 23,431,677-23,431,799	+	ENSG00000254564 Exon structure			ENSG00000254564
179	chr11: 23,444,818-23,445,121							SHGC-155004
180	chr11: 23,478,068-23,480,730	+	THAP12P4 Exon structure		100129382	ENSG00000254465	THAP domain containing 12 pseudogene 4
181	chr11: 23,520,295-23,521,239	+	RPS2P38 Exon structure		196188	ENSG00000240881	ribosomal protein S2 pseudogene 38
182	chr11: 23,564,531-23,564,760							cSRL-5f4	D11S1195
183	chr11: 23,581,022-23,581,287							AFM178xf12	D11S915	RHmkr		Polym	onYAC
184	chr11: 23,581,022-23,581,364							SHGC-150059
185	chr11: 23,618,147-23,618,355							cSRL-5e10	D11S1184
186	chr11: 23,700,480-23,702,906	-	GC11M023700
187	chr11: 23,705,428-23,747,987	+	GC11P023705
188	chr11: 23,730,588-23,796,970	+	LOC105376593 Exon structure		105376593	ENSG00000255193
189	chr11: 23,761,330-23,804,598	-	ENSG00000254861 Exon structure			ENSG00000254861
190	chr11: 23,806,904-23,807,183							SHGC-144219
191	chr11: 23,847,412-23,847,539							WI-3473	D11S4006	RHmkr
192	chr11: 23,849,778-23,849,882	+	RNU6-783P Exon structure		106479912	ENSG00000252519	RNA, U6 small nuclear 783, pseudogene
193	chr11: 23,863,092-23,863,233							stSG30508		RHmkr	cDNA
194	chr11: 23,886,135-23,893,557	+	ENSG00000277803 Exon structure			ENSG00000277803
195	chr11: 23,917,596-23,922,349	+	GC11P023918
196	chr11: 23,934,696-23,936,041	-	GC11M023934
197	chr11: 23,937,809-23,938,805	-	GC11M023937
198	chr11: 23,947,760-23,993,284	-	GC11M023947
199	chr11: 23,953,158-23,953,271							SHGC-14451	D11S4665	RHmkr
200	chr11: 23,953,294-23,967,337	-	GC11M023953
201	chr11: 24,017,948-24,022,174	-	GC11M024017
202	chr11: 24,018,929-24,018,947	+	GC11P024018
203	chr11: 24,083,298-24,114,208	+	GC11P024083
204	chr11: 24,112,771-24,113,107							SHGC-106405

Marker types:
RHmkr	STSs mapped on RH map
cDNA	STSs derived from cDNA
Polym	Polymorphic markers
onYAC	STSs mapped on YAC contigs

GeneLoc map region for Chromosome 11 (20,113,448 - 24,117,001 bp) around "ENSG00000254820"