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Display genomic neighborhood for:

gene
enhancer
genomic coordinates
Marker types:
RHmkrSTSs mapped on RH map
cDNA STSs derived from cDNA
PolymPolymorphic markers
onYACSTSs mapped on YAC contigs

   GeneLoc map region for Chromosome 19 (27,286,806 - 31,286,806 bp) around "AFMa084xf1 "


GenesEnhancers
#
#
Location
Location
Strand
Strand
Gene
Gene
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
Genetic Marker
Genetic Marker
Marker D-number
Marker D-number
Marker type
Marker type
1chr19: 27,485,216-27,488,467 + GC19P027485









2chr19: 27,520,104-27,642,524 - LOC105376906
Exon structure

105376906







3chr19: 27,570,106-27,573,811 + GC19P027570









4chr19: 27,629,292-27,633,281 - GC19M027629









5chr19: 27,638,483-27,646,483 - ERVK-28
Exon structure

106707175 ENSG00000267696 endogenous retrovirus group K member 28





6chr19: 27,639,300-27,639,665 - ENSG00000279882
Exon structure


ENSG00000279882






7chr19: 27,642,031-27,642,312





22 D22S1651



8chr19: 27,650,688-27,651,191 + GC19P027650









9chr19: 27,681,259-27,685,262 - LOC105372345
Exon structure

105372345







10chr19: 27,684,580-27,793,940 - LINC00662
Exon structure
Hs.706547 148189 ENSG00000261824 long intergenic non-protein coding RNA 662





11chr19: 27,696,772-27,720,033 - GC19M027696









12chr19: 27,703,884-27,703,912 + GC19P027703









13chr19: 27,724,144-27,724,305





embl-AA018546




14chr19: 27,727,052-27,735,923 - GC19M027727









15chr19: 27,747,324-27,747,480





WI-11155
RHmkr


16chr19: 27,757,184-27,760,849 - ENSG00000261770
Exon structure


ENSG00000261770






17chr19: 27,778,693-27,778,797





SHGC-58650




18chr19: 27,792,426-27,793,128 - GC19M027792









19chr19: 27,793,463-27,918,863 + ENSG00000267575
Exon structure


ENSG00000267575






20chr19: 27,793,467-27,806,782 + LOC101927151
Exon structure

101927151







21chr19: 27,793,488-27,984,984 + ENSG00000272635
Exon structure


ENSG00000272635






22chr19: 27,798,040-27,798,229





stSG9396




23chr19: 27,798,068-27,798,097 + PIR47719
Exon structure










24chr19: 27,798,120-27,798,245





SGC33806
RHmkr cDNA

25chr19: 27,799,101-27,799,130 + PIR56193
Exon structure










26chr19: 27,800,355-27,800,521





AFM326xb1 D19S419

Polym onYAC
27chr19: 27,800,971-27,800,998 + PIR41847
Exon structure










28chr19: 27,802,838-27,803,472 + ENSG00000281468
Exon structure


ENSG00000281468






29chr19: 27,803,223-27,803,369





stSG46885
RHmkr cDNA

30chr19: 27,803,538-27,804,392 + VN1R95P
Exon structure

100131141 ENSG00000267264 vomeronasal 1 receptor 95 pseudogene





31chr19: 27,805,423-27,806,208 - SLC25A1P5
Exon structure

642290 ENSG00000267323 solute carrier family 25 member 1 pseudogene 5





32chr19: 27,806,625-27,806,757





SGC32471
RHmkr


33chr19: 27,825,775-27,826,109





SHGC-105994




34chr19: 27,826,268-27,826,559





RH123164




35chr19: 27,849,465-27,861,940 - LOC105372348
Exon structure

105372348







36chr19: 27,849,730-27,889,222 - ENSG00000266977
Exon structure


ENSG00000266977






37chr19: 27,877,976-27,878,002 - PIR52514
Exon structure










38chr19: 27,885,219-27,885,248 + PIR55271
Exon structure










39chr19: 27,886,281-27,909,543 - LOC105372347
Exon structure

105372347







40chr19: 27,889,243-27,889,271 - PIR55156
Exon structure










41chr19: 27,892,495-27,898,927 - ENSG00000267389
Exon structure


ENSG00000267389






42chr19: 27,896,512-27,897,433 - LOC100132081
Exon structure

100132081







43chr19: 27,897,782-27,900,124 - GC19M027897









44chr19: 27,902,595-27,984,743 + ENSG00000267623
Exon structure


ENSG00000267623






45chr19: 27,908,356-27,908,554 - ENSG00000267768
Exon structure


ENSG00000267768






46chr19: 27,918,943-27,929,370 + ENSG00000267630
Exon structure


ENSG00000267630






47chr19: 27,944,470-27,951,773 - GC19M027944









48chr19: 27,944,470-27,951,773 - GC19M027945









49chr19: 27,953,149-27,953,447





SHGC-112595




50chr19: 27,968,928-27,969,359 + GC19P027968









51chr19: 27,982,742-27,983,338 - LOC100419833
Exon structure

100419833 ENSG00000266906






52chr19: 27,983,489-28,000,401 - LOC105372346
Exon structure

105372346







53chr19: 27,993,169-27,993,443





RH121393




54chr19: 28,005,021-28,039,159 + GC19P028005









55chr19: 28,065,267-28,125,430 + ENSG00000267509
Exon structure


ENSG00000267509






56chr19: 28,071,693-28,078,855 - GC19M028071









57chr19: 28,110,233-28,114,725 + GC19P028110









58chr19: 28,114,585-28,116,901 - GC19M028114









59chr19: 28,132,442-28,132,635





SHGC-150935




60chr19: 28,132,545-28,132,694





AFMa058xc5 D19S931 RHmkr
Polym onYAC
61chr19: 28,138,218-28,138,368





WI-5857 D19S1026


onYAC
62chr19: 28,212,447-28,229,313 + GC19P028212









63chr19: 28,235,067-28,235,255





SHGC-969 D19S222 RHmkr

onYAC
64chr19: 28,239,095-28,278,111 - GC19M028239









65chr19: 28,294,093-28,313,500 - ENSG00000266928
Exon structure


ENSG00000266928






66chr19: 28,311,774-28,312,058





SHGC-155686




67chr19: 28,316,705-28,386,204 - ENSG00000267320
Exon structure


ENSG00000267320






68chr19: 28,341,633-28,406,371 - GC19M028342









69chr19: 28,387,355-28,387,445





SHGC-16685




70chr19: 28,394,851-28,396,428 - ENSG00000267238
Exon structure


ENSG00000267238






71chr19: 28,398,203-28,408,373 + GC19P028398









72chr19: 28,418,483-28,429,490 - ENSG00000260725
Exon structure


ENSG00000260725






73chr19: 28,435,244-28,435,274 + GC19P028435









74chr19: 28,435,388-28,727,694 - LOC100420587
Exon structure

100420587







75chr19: 28,435,388-28,727,680 - ENSG00000283403
Exon structure


ENSG00000283403






76chr19: 28,437,060-28,535,277 - ENSG00000267243
Exon structure


ENSG00000267243






77chr19: 28,444,160-28,448,976 + LOC105372349
Exon structure

105372349







78chr19: 28,480,268-28,480,437





SHGC-5838 D19S1063 RHmkr


79chr19: 28,491,719-28,512,721 + GC19P028491









80chr19: 28,491,864-28,632,728 - ENSG00000266893
Exon structure


ENSG00000266893






81chr19: 28,509,238-28,518,728 + ENSG00000267423
Exon structure


ENSG00000267423






82chr19: 28,536,151-28,542,157 - GC19M028536









83chr19: 28,539,457-28,540,692 + GC19P028539









84chr19: 28,551,239-28,552,364 - GC19M028551









85chr19: 28,580,362-28,580,391 - PIR53502
Exon structure










86chr19: 28,590,437-28,590,466 - PIR35876
Exon structure










87chr19: 28,598,024-28,598,052 - PIR43229
Exon structure










88chr19: 28,602,379-28,648,303 - ENSG00000267537
Exon structure


ENSG00000267537






89chr19: 28,606,688-28,615,229 + LOC102724908
Exon structure

102724908 ENSG00000266976






90chr19: 28,607,990-28,608,016 - PIR61548
Exon structure










91chr19: 28,608,077-28,608,106 - PIR36390
Exon structure










92chr19: 28,610,121-28,610,147 - PIR56623
Exon structure










93chr19: 28,610,852-28,610,882 - PIR33961
Exon structure










94chr19: 28,610,852-28,610,882 - GC19M028612









95chr19: 28,611,463-28,612,524 + GC19P028611









96chr19: 28,616,583-28,616,609 - PIR53195
Exon structure










97chr19: 28,647,519-28,648,484 + GC19P028647









98chr19: 28,671,067-28,672,750 + GC19P028671









99chr19: 28,678,519-28,679,953 - GC19M028678









100chr19: 28,683,071-28,727,777 - ENSG00000283269
Exon structure


ENSG00000283269






101chr19: 28,708,019-28,708,046 - PIR57679
Exon structure










102chr19: 28,764,887-28,811,921 + GC19P028764









103chr19: 28,782,821-28,783,025





sts-H93608
RHmkr cDNA

104chr19: 28,785,451-28,787,337 - GC19M028786









105chr19: 28,790,610-28,793,070 - MAN1A2P1
Exon structure

100129507 ENSG00000267799 mannosidase alpha class 1A member 2 pseudogene 1





106chr19: 28,859,221-28,860,890 + GC19P028859









107chr19: 28,869,796-28,879,170 + ENSG00000267617
Exon structure


ENSG00000267617






108chr19: 28,883,430-28,953,245 + ENSG00000267528
Exon structure


ENSG00000267528






109chr19: 28,892,931-28,895,949 + ENSG00000267683
Exon structure


ENSG00000267683






110chr19: 28,896,198-28,896,346





sts-H99213
RHmkr cDNA

111chr19: 28,949,437-28,950,200 - ENSG00000267027
Exon structure


ENSG00000267027






112chr19: 28,960,506-28,964,943 - ENSG00000267240
Exon structure


ENSG00000267240






113chr19: 28,965,131-28,970,874 + LINC00906
Exon structure
Hs.112651 148145 ENSG00000267339 long intergenic non-protein coding RNA 906





114chr19: 28,968,468-28,970,672 + LOC102724958
Exon structure

102724958







115chr19: 28,991,796-28,992,094





RH118694




116chr19: 29,001,670-29,001,775 + RNA5SP470
Exon structure

100873713 ENSG00000252272 RNA, 5S ribosomal pseudogene 470





117chr19: 29,002,555-29,013,955 + LINC01532
Exon structure
Hs.176539 100505835 ENSG00000267014 long intergenic non-protein coding RNA 1532





118chr19: 29,006,936-29,007,154





AFMb340va9 D19S920

Polym onYAC
119chr19: 29,011,486-29,011,774





SHGC-132549




120chr19: 29,011,657-29,011,768





SGC35855
RHmkr cDNA

121chr19: 29,014,454-29,014,561





SHGC-7427




122chr19: 29,094,367-29,094,397 + PIR62427
Exon structure










123chr19: 29,094,367-29,094,397 + GC19P029095









124chr19: 29,110,319-29,127,780 + GC19P029110









125chr19: 29,119,242-29,119,536





SHGC-80721




126chr19: 29,131,553-29,131,753





SHGC-130179




127chr19: 29,158,015-29,158,331





SHGC-110007




128chr19: 29,205,321-29,213,541 - UQCRFS1
Exon structure
Hs.743307 7386 ENSG00000169021 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1





129chr19: 29,207,460-29,207,628





sts-L32977




130chr19: 29,212,190-29,212,220 - PIR40426
Exon structure










131chr19: 29,212,190-29,212,220 - GC19M029213









132chr19: 29,213,235-29,223,137 + LOC105372352
Exon structure

105372352







133chr19: 29,213,235-29,215,815 + ENSG00000267498
Exon structure


ENSG00000267498






134chr19: 29,220,864-29,221,666 + ENSG00000276251
Exon structure


ENSG00000276251






135chr19: 29,222,542-29,223,137 + ENSG00000276631
Exon structure


ENSG00000276631






136chr19: 29,233,090-29,233,385 - RN7SL340P
Exon structure

106481016 ENSG00000241604 RNA, 7SL, cytoplasmic 340, pseudogene





137chr19: 29,239,664-29,239,951





AFM269xg5 D19S409 RHmkr
Polym onYAC
138chr19: 29,239,678-29,239,780





1135/1136 D19S384



139chr19: 29,239,694-29,239,864





AFM269xg5 D19S409 RHmkr
Polym onYAC
140chr19: 29,264,889-29,274,409 - GC19M029264









141chr19: 29,272,442-29,272,569





907/908 D19S255

Polym
142chr19: 29,286,806-29,286,949





AFMa084xf1 D19S932

Polym
143chr19: 29,287,011-29,525,752 - LOC284395
Exon structure
Hs.631601 284395 ENSG00000264515 Uncharacterized LOC284395 (est)





144chr19: 29,305,723-29,310,129 + GC19P029305









145chr19: 29,306,433-29,306,545





AFMa224wc9 D19S875

Polym onYAC
146chr19: 29,312,605-29,313,088 + GC19P029312









147chr19: 29,315,697-29,358,583 - GC19M029315









148chr19: 29,385,765-29,386,108 - GC19M029385









149chr19: 29,391,384-29,391,412 - PIR46863
Exon structure










150chr19: 29,412,769-29,413,419 - GC19M029412









151chr19: 29,420,095-29,420,309





AFMb332xe5 D19S919 RHmkr
Polym onYAC
152chr19: 29,423,345-29,423,464





19233 D19S818



153chr19: 29,426,590-29,426,785










154chr19: 29,448,038-29,448,380 + ENSG00000267574
Exon structure


ENSG00000267574






155chr19: 29,489,775-29,526,948 - ENSG00000266248
Exon structure


ENSG00000266248






156chr19: 29,506,966-29,509,041 - ENSG00000279387
Exon structure


ENSG00000279387






157chr19: 29,523,217-29,523,366





SGC33351
RHmkr cDNA

158chr19: 29,525,431-29,564,551 + VSTM2B
Exon structure
Hs.451618 342865 ENSG00000187135 V-set and transmembrane domain containing 2B





159chr19: 29,551,049-29,551,361





RH119262




160chr19: 29,594,601-29,594,721





Mfd11 D19S49

Polym
161chr19: 29,603,348-29,603,652





SHGC-141601




162chr19: 29,604,017-29,617,255 + POP4
Exon structure
Hs.412870 10775 ENSG00000105171 POP4 homolog, ribonuclease P/MRP subunit





163chr19: 29,615,513-29,615,631





stSG44980
RHmkr cDNA

164chr19: 29,615,614-29,615,796





embl-W74757




165chr19: 29,617,081-29,617,230





WI-11914
RHmkr cDNA

166chr19: 29,630,264-29,665,243 - LOC105372353
Exon structure

105372353







167chr19: 29,661,017-29,661,115





1287/1288 D19S426

Polym
168chr19: 29,661,115-29,661,428 - GC19M029661









169chr19: 29,663,720-29,664,002 - GC19M029663









170chr19: 29,664,003-29,664,261 - GC19M029664









171chr19: 29,665,056-29,675,477 + PLEKHF1
Exon structure
Hs.466383 79156 ENSG00000166289 pleckstrin homology and FYVE domain containing 1





172chr19: 29,675,065-29,675,230





stSG34868




173chr19: 29,684,237-29,686,966 - GC19M029684









174chr19: 29,698,886-29,715,789 - C19orf12
Exon structure
Hs.529094 83636 ENSG00000131943 chromosome 19 open reading frame 12





175chr19: 29,699,621-29,699,776





stSG31810




176chr19: 29,699,622-29,699,802





embl-N33225




177chr19: 29,699,637-29,699,821





sts-N21279
RHmkr cDNA

178chr19: 29,699,917-29,700,041





SGC34217
RHmkr cDNA

179chr19: 29,701,246-29,701,372





stSG22464
RHmkr cDNA

180chr19: 29,701,748-29,701,958





SHGC-11607 D19S1092 RHmkr cDNA

181chr19: 29,701,939-29,702,065





stSG32024
RHmkr cDNA

182chr19: 29,811,898-29,824,312 + CCNE1
Exon structure
Hs.244723 898 ENSG00000105173 cyclin E1





183chr19: 29,901,696-29,901,869 - ENSG00000267433
Exon structure


ENSG00000267433






184chr19: 29,915,862-29,917,830 + ENSG00000278895
Exon structure


ENSG00000278895






185chr19: 29,919,288-29,919,487





PrG-6331/PrG-6332 D19S856 RHmkr


186chr19: 29,921,135-29,922,171 + PPIAP58
Exon structure

126170 ENSG00000267258 peptidylprolyl isomerase A pseudogene 58





187chr19: 29,923,644-30,016,612 + URI1
Exon structure
Hs.466391 8725 ENSG00000105176 URI1, prefoldin like chaperone





188chr19: 29,925,545-29,925,865 + GC19P029925









189chr19: 29,926,120-29,926,325





CHLC.GGAA2A03 D19S433

Polym
190chr19: 29,956,306-29,957,013 - RPL9P32
Exon structure

727865 ENSG00000242100 ribosomal protein L9 pseudogene 32





191chr19: 29,956,369-29,956,988 - GC19M029957









192chr19: 29,976,349-29,976,484





stSG16410




193chr19: 29,979,035-29,981,049 + GC19P029979









194chr19: 29,979,841-29,980,994 - GC19M029979









195chr19: 29,981,727-29,981,852





SGC30870
RHmkr cDNA

196chr19: 30,014,692-30,014,841





SHGC-30736
RHmkr cDNA

197chr19: 30,015,470-30,015,549





sts-Z41049
RHmkr cDNA

198chr19: 30,016,466-30,016,589





sts-R63092
RHmkr cDNA

199chr19: 30,028,741-30,029,916 - ENSG00000267006
Exon structure


ENSG00000267006






200chr19: 30,037,225-30,038,390 + TAF9P3
Exon structure

163088 ENSG00000267692 TATA-box binding protein associated factor 9 pseudogene 3





201chr19: 30,037,423-30,038,181 + ENSG00000266910
Exon structure


ENSG00000266910






202chr19: 30,037,795-30,038,336 - GC19M030037









203chr19: 30,054,241-30,054,508





CHLC.GATA44D10 D19S590 RHmkr


204chr19: 30,075,527-30,075,903 + GC19P030075









205chr19: 30,088,591-30,089,312 - GC19M030088









206chr19: 30,111,049-30,111,319 + GC19P030111









207chr19: 30,114,833-30,114,883 - GC19M030115









208chr19: 30,114,833-30,114,883 - GC19M030119









209chr19: 30,114,933-30,114,983 - GC19M030114









210chr19: 30,114,933-30,114,983 - GC19M030118









211chr19: 30,115,133-30,115,183 - GC19M030116









212chr19: 30,115,133-30,115,183 - GC19M030117









213chr19: 30,172,745-30,174,027 - GC19M030172









214chr19: 30,219,666-30,228,715 - ENSG00000267223
Exon structure


ENSG00000267223






215chr19: 30,219,761-30,221,856 - GC19M030220









216chr19: 30,225,044-30,713,538 + ZNF536
Exon structure
Hs.378901 9745 ENSG00000198597 zinc finger protein 536





217chr19: 30,234,688-30,234,805





AFM205yf10 D19S405 RHmkr
Polym
218chr19: 30,234,696-30,234,805





SHGC-2301




219chr19: 30,240,101-30,240,131 - PIR32012
Exon structure










220chr19: 30,240,101-30,240,131 - GC19M030241









221chr19: 30,243,131-30,244,238 - GC19M030243









222chr19: 30,244,925-30,244,951 - PIR54360
Exon structure










223chr19: 30,264,374-30,264,576





UT758 D19S396

Polym
224chr19: 30,265,743-30,271,210 - GC19M030265









225chr19: 30,276,353-30,276,471 + GC19P030276









226chr19: 30,294,415-30,294,693





AFMa297ye9 D19S882

Polym onYAC
227chr19: 30,333,769-30,333,995 + GC19P030333









228chr19: 30,351,285-30,351,419 + GC19P030351









229chr19: 30,357,787-30,360,846 + GC19P030357









230chr19: 30,363,548-30,363,844





SHGC-82072




231chr19: 30,366,570-30,366,850





916/933 D19S250

Polym
232chr19: 30,448,599-30,448,828 + GC19P030448









233chr19: 30,462,187-30,462,350





AFM324zg9
RHmkr


234chr19: 30,488,865-30,490,984 + GC19P030488









235chr19: 30,492,425-30,492,442 + GC19P030492









236chr19: 30,525,755-30,526,638 - GC19M030525









237chr19: 30,527,851-30,529,624 - GC19M030527









238chr19: 30,539,802-30,540,028





AffySTS000050




239chr19: 30,553,956-30,558,058 + ENSG00000280061
Exon structure


ENSG00000280061






240chr19: 30,557,765-30,557,927





WI-22372
RHmkr cDNA

241chr19: 30,576,175-30,576,516





SHGC-78477




242chr19: 30,577,899-30,578,071 + GC19P030577









243chr19: 30,643,045-30,644,199 - GC19M030643









244chr19: 30,659,878-30,660,109





SHGC-150936




245chr19: 30,659,906-30,660,077





AFMc021wd1 D19S928 RHmkr
Polym onYAC
246chr19: 30,665,274-30,668,647 - ENSG00000267760
Exon structure


ENSG00000267760






247chr19: 30,712,213-30,712,366





NIB1793
RHmkr cDNA

248chr19: 30,712,460-30,712,616 + GC19P030712









249chr19: 30,712,781-30,712,910





WI-13564
RHmkr cDNA

250chr19: 30,713,231-30,713,392





stSG42131
RHmkr cDNA

251chr19: 30,716,100-30,719,674 - LOC105372354
Exon structure

105372354







252chr19: 30,755,606-30,755,799 + GC19P030755









253chr19: 30,761,401-30,762,893 - GC19M030761









254chr19: 30,817,792-30,817,913 + GC19P030817









255chr19: 30,824,835-30,825,291





UT7989 D19S563

Polym
256chr19: 30,850,975-30,872,507 + ENSG00000267081
Exon structure


ENSG00000267081






257chr19: 30,874,981-30,875,026 + GC19P030874









258chr19: 30,907,199-30,909,155 + LINC01834
Exon structure

107985280 ENSG00000261316 long intergenic non-protein coding RNA 1834





259chr19: 30,942,044-30,944,030 - GC19M030942









260chr19: 30,946,582-30,957,192 + ENSG00000267378
Exon structure


ENSG00000267378






261chr19: 30,957,226-30,958,524 - GC19M030957









262chr19: 30,961,210-30,976,600 + GC19P030961









263chr19: 31,016,708-31,016,827 + GC19P031016









264chr19: 31,023,359-31,030,274 + LOC105372355
Exon structure

105372355







265chr19: 31,051,353-31,051,554





918/936 D19S249

Polym
266chr19: 31,051,610-31,052,455 + GC19P031052









267chr19: 31,076,888-31,084,463 + GC19P031076









268chr19: 31,100,304-31,147,981 + LOC105372358
Exon structure

105372358 ENSG00000284430






269chr19: 31,125,853-31,139,925 - LOC105372356
Exon structure

105372356







270chr19: 31,137,528-31,137,792





CHLC.GATA49C08




271chr19: 31,149,877-31,150,405 + GC19P031149









272chr19: 31,167,516-31,207,663 + LINC01791
Exon structure

107985312 ENSG00000267777 long intergenic non-protein coding RNA 1791





273chr19: 31,223,278-31,223,463





150XA9-1/150XA9-2 D19S576


onYAC
274chr19: 31,249,382-31,270,036 - GC19M031249









275chr19: 31,251,464-31,261,917 + GC19P031251









276chr19: 31,259,057-31,259,332 + GC19P031259









277chr19: 31,275,055-31,275,231





stSG22414
RHmkr cDNA

278chr19: 31,275,469-31,275,595





stSG15437
RHmkr cDNA

279chr19: 31,276,180-31,276,323





stSG51842
RHmkr cDNA

280chr19: 31,279,263-31,279,408





CHLC.GCT2C12



onYAC