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Display genomic neighborhood for:

gene
enhancer
genomic coordinates
Marker types:
RHmkrSTSs mapped on RH map
cDNA STSs derived from cDNA
PolymPolymorphic markers
onYACSTSs mapped on YAC contigs

   GeneLoc map region for Chromosome 16 (61,413,306 - 65,413,520 bp) around "SHGC-651"


GenesEnhancers
#
#
Location
Location
Strand
Strand
Gene
Gene
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
Genetic Marker
Genetic Marker
Marker D-number
Marker D-number
Marker type
Marker type
1chr16: 61,434,937-61,435,224





RH123279




2chr16: 61,456,638-61,458,951 + GC16P061456









3chr16: 61,466,042-61,466,312





RH119791




4chr16: 61,501,583-61,501,929





RH119258




5chr16: 61,503,608-61,508,371 - GC16M061503









6chr16: 61,517,930-61,518,200





SHGC-142497




7chr16: 61,535,800-61,538,302 - GC16M061535









8chr16: 61,590,338-61,590,656





SHGC-89214




9chr16: 61,593,586-61,613,072 + GC16P061593









10chr16: 61,599,718-61,689,444 - GC16M061599









11chr16: 61,622,494-61,622,711





SHGC-130518




12chr16: 61,647,242-62,037,035 - CDH8
Exon structure
Hs.368322 1006 ENSG00000150394 cadherin 8





13chr16: 61,647,309-61,647,407





WI-14211
RHmkr cDNA

14chr16: 61,647,352-61,647,455





TIGR-A006M36
RHmkr cDNA

15chr16: 61,649,547-61,649,702 + GC16P061649









16chr16: 61,691,756-61,693,750 - ENSG00000260600
Exon structure


ENSG00000260600






17chr16: 61,695,857-61,696,108 + GC16P061695









18chr16: 61,726,536-61,726,704





SHGC-15929 D16S3337 RHmkr cDNA

19chr16: 61,739,182-61,759,180 + GC16P061739









20chr16: 61,743,154-61,743,476 - RN7SKP76
Exon structure

106481808 ENSG00000201289 RNA, 7SK small nuclear pseudogene 76





21chr16: 61,743,157-61,743,306





SHGC-32357
RHmkr cDNA

22chr16: 61,797,434-61,803,294 - GC16M061797









23chr16: 61,834,331-61,834,616





SHGC-79337




24chr16: 61,844,935-61,845,214





RH123361




25chr16: 61,888,418-61,888,447 + PIR37105
Exon structure










26chr16: 61,888,418-61,888,447 + GC16P061889









27chr16: 61,918,321-61,940,988 + LOC105371305
Exon structure

105371305 ENSG00000260115






28chr16: 61,926,594-61,926,728





WI-5943 D16S2997 RHmkr

onYAC
29chr16: 61,930,218-61,930,417





AFM212xe11



onYAC
30chr16: 61,972,492-61,972,694





D16S533 D16S533



31chr16: 61,976,925-61,977,061





sN16Y1-14 D16S2896



32chr16: 61,979,680-61,979,813





WI-15820
RHmkr cDNA

33chr16: 61,981,136-61,981,981 - GC16M061981









34chr16: 62,036,034-62,036,378





RH120002




35chr16: 62,038,023-62,038,305





RH118451




36chr16: 62,055,852-62,057,172 + GC16P062055









37chr16: 62,065,976-62,067,525 + GC16P062065









38chr16: 62,070,844-62,079,654 + GC16P062070









39chr16: 62,079,554-62,079,829





CHLC.GATA67G11 D16S2620

Polym
40chr16: 62,108,709-62,108,905





RH119956




41chr16: 62,118,038-62,127,572 - GC16M062118









42chr16: 62,119,728-62,123,479 + GC16P062119









43chr16: 62,132,820-62,134,377 + GC16P062132









44chr16: 62,155,612-62,161,803 - GC16M062155









45chr16: 62,176,086-62,176,240





SHGC-9014




46chr16: 62,178,766-62,179,061





SHGC-80975




47chr16: 62,187,539-62,187,646 - GC16M062187









48chr16: 62,187,540-62,187,646 - RNU6-21P
Exon structure

100302738 ENSG00000207441 RNA, U6 small nuclear 21, pseudogene





49chr16: 62,218,846-62,219,159





SHGC-110685




50chr16: 62,219,759-62,219,945





ms115 D16S669



51chr16: 62,224,894-62,225,563 + GC16P062224









52chr16: 62,249,650-62,250,553 + GC16P062249









53chr16: 62,250,716-62,250,746 + PIR42672
Exon structure










54chr16: 62,250,716-62,250,746 + GC16P062251









55chr16: 62,251,604-62,252,048 + GC16P062252









56chr16: 62,255,138-62,257,665 - GC16M062255









57chr16: 62,285,670-62,287,287 - GC16M062285









58chr16: 62,304,152-62,304,299





AFM330vd9 D16S514 RHmkr
Polym onYAC
59chr16: 62,304,172-62,304,292





AFM330vd9 D16S514 RHmkr
Polym onYAC
60chr16: 62,342,419-62,342,557 - GC16M062342









61chr16: 62,342,419-62,342,557 - GC16M062343









62chr16: 62,342,420-62,342,557 + ENSG00000280261
Exon structure


ENSG00000280261






63chr16: 62,353,760-62,354,534 - GC16M062353









64chr16: 62,357,371-62,357,746 + ENSG00000237901
Exon structure


ENSG00000237901






65chr16: 62,396,536-62,396,553 - GC16M062396









66chr16: 62,414,039-62,414,169





s327B11 D16S2781



67chr16: 62,420,662-62,421,070 - GC16M062420









68chr16: 62,432,799-62,433,076





SHGC-142629




69chr16: 62,494,308-62,494,639





SHGC-143873




70chr16: 62,524,505-62,524,844





SHGC-142857




71chr16: 62,596,372-62,598,449 + ENSG00000231589
Exon structure


ENSG00000231589






72chr16: 62,596,793-62,596,950





s58G9 D16S2856



73chr16: 62,644,090-62,645,370 - GC16M062644









74chr16: 62,652,350-62,653,341 - GC16M062652









75chr16: 62,679,268-62,682,241 + LOC105371306
Exon structure

105371306







76chr16: 62,686,225-62,686,479





CHLC.ATA16A05 D16S755


onYAC
77chr16: 62,699,006-62,701,734 + GC16P062699









78chr16: 62,711,294-62,711,711 - GC16M062711









79chr16: 62,711,811-62,711,838 + PIR62032
Exon structure










80chr16: 62,723,650-62,723,810 + GC16P062723









81chr16: 62,725,618-62,835,682 + LOC102723560
Exon structure

102723560







82chr16: 62,731,686-62,732,866 + GC16P062731









83chr16: 62,764,493-62,764,741





s330D1 D16S2791



84chr16: 62,793,868-62,796,002 + GC16P062793









85chr16: 62,808,222-62,808,706 - ENSG00000260332
Exon structure


ENSG00000260332






86chr16: 62,822,217-62,822,460





s69F12 D16S2871



87chr16: 62,844,290-62,845,160 - GC16M062844









88chr16: 62,844,784-62,855,709 + GC16P062844









89chr16: 62,845,701-62,845,937





212WG1-1/212WG1-2 D16S739 RHmkr


90chr16: 62,908,884-62,909,034





s5D1 D16S2858



91chr16: 62,917,455-62,917,734





SHGC-81700




92chr16: 62,919,404-62,920,222 + GC16P062919









93chr16: 62,927,911-62,928,079





D16S164.PCR1 D16S164



94chr16: 62,928,274-62,930,614 - GC16M062928









95chr16: 62,933,020-62,938,837 + GC16P062933









96chr16: 62,933,316-62,933,586





SHGC-140394




97chr16: 62,942,574-62,943,611 + GC16P062942









98chr16: 62,942,620-62,943,637 + GC16P062943









99chr16: 62,955,014-62,957,492 + GC16P062955









100chr16: 62,962,277-62,962,492





AFMa048ye1 D16S3129

Polym onYAC
101chr16: 62,963,478-62,964,600 - GC16M062963









102chr16: 62,964,778-62,967,618 + GC16P062964









103chr16: 62,967,726-62,986,616 - GC16M062967









104chr16: 62,979,636-62,982,601 + GC16P062979









105chr16: 63,029,703-63,029,729 + PIR39780
Exon structure










106chr16: 63,049,051-63,049,329





RH122477




107chr16: 63,050,145-63,050,258





AFM304xf1 D16S508 RHmkr
Polym onYAC
108chr16: 63,050,145-63,050,235





AFM304xf1 D16S508 RHmkr
Polym onYAC
109chr16: 63,052,704-63,052,856





Mfd65 D16S267

Polym
110chr16: 63,056,786-63,129,654 - ENSG00000261502
Exon structure


ENSG00000261502






111chr16: 63,058,088-63,090,302 - LOC105371307
Exon structure

105371307







112chr16: 63,066,526-63,066,990 - ENSG00000269986
Exon structure


ENSG00000269986






113chr16: 63,074,416-63,085,126 - GC16M063074









114chr16: 63,083,965-63,084,165





UT5021 D16S674



115chr16: 63,114,404-63,143,187 - GC16M063114









116chr16: 63,174,696-63,175,034





SHGC-141868




117chr16: 63,180,375-63,181,084 - UBE2FP2
Exon structure

101060189 ENSG00000261199 ubiquitin conjugating enzyme E2 F (putative) pseudogene 2





118chr16: 63,180,610-63,181,071 - GC16M063181









119chr16: 63,286,914-63,618,092 - LOC105371308
Exon structure

105371308







120chr16: 63,291,999-63,292,031 - GC16M063291









121chr16: 63,314,264-63,618,046 - ENSG00000260658
Exon structure


ENSG00000260658






122chr16: 63,350,759-63,351,149 - RPS15AP34
Exon structure

390735 ENSG00000241808 ribosomal protein S15a pseudogene 34





123chr16: 63,368,844-63,369,456 + ENSG00000261743
Exon structure


ENSG00000261743






124chr16: 63,386,337-63,386,655





SHGC-145357




125chr16: 63,388,090-63,388,879 - GC16M063388









126chr16: 63,389,918-63,397,084 + GC16P063389









127chr16: 63,397,707-63,397,946 + ENSG00000279225
Exon structure


ENSG00000279225






128chr16: 63,406,964-63,409,835 - GC16M063406









129chr16: 63,413,306-63,413,520





SHGC-651




130chr16: 63,413,344-63,413,545





AFM024xg1 D16S400 RHmkr
Polym onYAC
131chr16: 63,415,232-63,496,854 + GC16P063415









132chr16: 63,416,246-63,416,272 + PIR49605
Exon structure










133chr16: 63,422,969-63,423,266





SHGC-80107




134chr16: 63,479,628-63,479,788





D16S265.PCR1 D16S265



135chr16: 63,479,637-63,479,740





Mfd23 D16S265

Polym
136chr16: 63,488,949-63,489,094





s53B8 D16S2838



137chr16: 63,564,893-63,565,093





AFM274ya5 D16S503 RHmkr
Polym onYAC
138chr16: 63,564,899-63,565,125





AFM274ya5 D16S503 RHmkr
Polym onYAC
139chr16: 63,580,260-63,580,532





RH121725




140chr16: 63,594,632-63,599,658 + GC16P063594









141chr16: 63,613,390-63,613,545





WI-3015 D16S2958


onYAC
142chr16: 63,646,599-63,646,826





AFMb362we5 D16S3111 RHmkr
Polym
143chr16: 63,703,483-63,703,665 + ENSG00000259864
Exon structure


ENSG00000259864






144chr16: 63,730,220-63,755,868 + LINC02165
Exon structure

101927629 ENSG00000261014 long intergenic non-protein coding RNA 2165





145chr16: 63,764,275-63,764,443





CHLC.GATA64G06 D16S767



146chr16: 63,776,039-63,776,353





SHGC-79085




147chr16: 63,793,558-63,793,829





SHGC-80918




148chr16: 63,847,045-63,848,553 + LOC105371309
Exon structure

105371309







149chr16: 63,911,882-63,924,671 + GC16P063911









150chr16: 63,935,778-63,936,906 + ENSG00000261653
Exon structure


ENSG00000261653






151chr16: 64,058,444-64,058,917 + GC16P064058









152chr16: 64,083,479-64,083,635





s48F6 D16S2827



153chr16: 64,106,906-64,107,194 + GC16P064106









154chr16: 64,155,169-64,156,574 + ENSG00000260715
Exon structure


ENSG00000260715






155chr16: 64,183,582-64,183,834





WI-5306 D16S2994 RHmkr

onYAC
156chr16: 64,195,228-64,244,496 - GC16M064195









157chr16: 64,242,608-64,343,909 - ENSG00000261028
Exon structure


ENSG00000261028






158chr16: 64,260,326-64,261,241 - LOC729217
Exon structure

729217 ENSG00000260668






159chr16: 64,304,594-64,304,715 + GC16P064304









160chr16: 64,327,578-64,327,711





s22A6 D16S2701



161chr16: 64,328,706-64,330,289 - GC16M064328









162chr16: 64,340,918-64,352,942 - GC16M064340









163chr16: 64,344,305-64,535,040 + LOC105371310
Exon structure

105371310







164chr16: 64,345,030-64,346,589 + LOC105371311
Exon structure

105371311







165chr16: 64,353,112-64,353,316





SHGC-14766
RHmkr


166chr16: 64,363,268-64,363,614





SHGC-141938




167chr16: 64,364,781-64,600,247 + ENSG00000259846
Exon structure


ENSG00000259846






168chr16: 64,365,405-64,370,602 + GC16P064365









169chr16: 64,388,543-64,391,463 + GC16P064388









170chr16: 64,401,516-64,401,652





SHGC-13338




171chr16: 64,409,598-64,409,898





SHGC-142281




172chr16: 64,422,931-64,423,124





SHGC-85213




173chr16: 64,461,326-64,461,477





stSG21473




174chr16: 64,470,677-64,470,880





SHGC-35749
RHmkr cDNA

175chr16: 64,489,979-64,496,572 - GC16M064489









176chr16: 64,496,611-64,497,940 + GC16P064496









177chr16: 64,514,393-64,517,080 - GC16M064514









178chr16: 64,531,854-64,532,041





CHLC.GATA196B10 D16S3393

Polym
179chr16: 64,567,833-64,588,841 - GC16M064567









180chr16: 64,634,295-64,635,578 - GC16M064634









181chr16: 64,663,668-64,663,845





s306C5 D16S2739



182chr16: 64,689,756-64,690,069





SHGC-84556




183chr16: 64,702,701-64,709,415 - GC16M064702









184chr16: 64,735,925-64,737,283 + PPIAP48
Exon structure

111082978 ENSG00000260187 peptidylprolyl isomerase A pseudogene 48





185chr16: 64,738,323-64,738,564 + ENSG00000260068
Exon structure


ENSG00000260068






186chr16: 64,765,009-64,813,074 + GC16P064765









187chr16: 64,798,019-64,798,302





RH122961




188chr16: 64,866,877-64,868,967 - GC16M064866









189chr16: 64,904,799-64,916,386 + LOC105371313
Exon structure

105371313







190chr16: 64,938,841-64,942,040 - GC16M064938









191chr16: 64,943,753-65,126,112 - CDH11
Exon structure
Hs.116471 1009 ENSG00000140937 cadherin 11





192chr16: 64,943,784-64,943,909





stSG16022




193chr16: 64,943,963-64,944,093





sts-AA011540




194chr16: 64,946,868-64,946,991





sts-H96738




195chr16: 64,980,676-64,980,959





WI-9802 D16S3228


onYAC
196chr16: 64,981,123-64,983,227 - ENSG00000278893
Exon structure


ENSG00000278893






197chr16: 64,998,647-64,998,721





WI-2756 D16S438E


onYAC
198chr16: 64,998,647-64,998,753





469/470 D0S2402E, D16S2936E, D16S438E



199chr16: 65,033,144-65,033,303





AFMa246zd5 D16S3050

Polym
200chr16: 65,046,624-65,046,852





WI-5835 D16S3238


onYAC
201chr16: 65,050,248-65,050,580





SHGC-107626




202chr16: 65,109,689-65,109,807





SHGC-7105
RHmkr


203chr16: 65,113,654-65,113,817





s60H5 D16S2861



204chr16: 65,117,370-65,117,504





SHGC-10595
RHmkr


205chr16: 65,123,755-65,138,818 + LOC105371314
Exon structure

105371314







206chr16: 65,137,033-65,137,307





SHGC-142382




207chr16: 65,141,756-65,176,713 - LINC02126
Exon structure

101927650 ENSG00000259847 long intergenic non-protein coding RNA 2126





208chr16: 65,181,462-65,181,581 + GC16P065181









209chr16: 65,189,337-65,204,677 + GC16P065189









210chr16: 65,190,973-65,234,914 - ENSG00000260834
Exon structure


ENSG00000260834






211chr16: 65,216,158-65,216,309





SHGC-14188
RHmkr


212chr16: 65,251,428-65,251,593





AFMa130yh5 D16S3021

Polym onYAC
213chr16: 65,287,125-65,304,465 + GC16P065287









214chr16: 65,289,129-65,289,844 - GC16M065289









215chr16: 65,305,386-65,305,582 + GC16P065305









216chr16: 65,337,221-65,338,691 - GC16M065337









217chr16: 65,338,813-65,342,607 + GC16P065338